MA_11517g0010


Description : Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana (sp|q9sy02|pp301_arath : 564.0)


Gene families : OG_01_0005512 (Archaeplastida) Phylogenetic Tree(s): OG_01_0005512_tree ,
OG_02_0092612 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_03_0073451 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_11517g0010
Cluster HCCA: Cluster_101

Target Alias Description ECC score Gene Family Method Actions
Gb_18840 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.04 Archaeplastida
Gb_27979 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.06 Archaeplastida
MA_8741g0010 No alias Pentatricopeptide repeat-containing protein At1g20230... 0.06 Archaeplastida
Smo104027 No alias Pentatricopeptide repeat-containing protein At4g16835,... 0.02 Archaeplastida
Smo10568 No alias Pentatricopeptide repeat-containing protein At3g53360,... 0.02 Archaeplastida
Smo109820 No alias Pentatricopeptide repeat-containing protein At3g49170,... 0.02 Archaeplastida
Smo125156 No alias Pentatricopeptide repeat-containing protein At3g29230... 0.02 Archaeplastida
Smo88015 No alias Putative pentatricopeptide repeat-containing protein... 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 148 181
IPR002885 Pentatricopeptide_repeat 444 491
IPR002885 Pentatricopeptide_repeat 55 88
IPR002885 Pentatricopeptide_repeat 211 258
IPR002885 Pentatricopeptide_repeat 343 390
IPR002885 Pentatricopeptide_repeat 90 119
IPR002885 Pentatricopeptide_repeat 522 542
IPR002885 Pentatricopeptide_repeat 286 306
IPR002885 Pentatricopeptide_repeat 312 339
No external refs found!