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  5. AMTR_s00006p00260480

AMTR_s00006p00260480 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00006.222

Description : External stimuli response.temperature.Hsp (heat-shock-responsive protein) families.Hsp60 family.Hsp60 protein


Gene families : OG_01_0000342 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000342_tree ,
OG_02_0001792 (LandPlants) Phylogenetic Tree(s): OG_02_0001792_tree ,
OG_03_0001989 (SeedPlants) Phylogenetic Tree(s): OG_03_0001989_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00006p00260480
Cluster HCCA: Cluster_170

Target Alias Description ECC score Gene Family Method Actions
AT1G26230 No alias TCP-1/cpn60 chaperonin family protein 0.11 Archaeplastida
AT1G55490 CPN60B, LEN1 chaperonin 60 beta 0.05 Archaeplastida
ChrSy.fgenesh.mRNA.28 No alias subunit beta of Cpn60 chaperonin complex. component... 0.04 Archaeplastida
Cpa|evm.model.tig00001269.7 No alias External stimuli response.temperature.Hsp... 0.03 Archaeplastida
Cre04.g231222 No alias External stimuli response.temperature.Hsp... 0.02 Archaeplastida
Cre17.g741450 No alias External stimuli response.temperature.Hsp... 0.03 Archaeplastida
GSVIVT01010149001 No alias External stimuli response.temperature.Hsp... 0.04 Archaeplastida
LOC_Os06g02380.2 No alias subunit beta of Cpn60 chaperonin complex. component... 0.02 Archaeplastida
LOC_Os12g17910.1 No alias subunit alpha of Cpn60 chaperonin complex. component... 0.03 Archaeplastida
Mp1g21640.1 No alias subunit beta of Cpn60 chaperonin complex. component... 0.02 Archaeplastida
Mp5g20470.1 No alias subunit alpha of Cpn60 chaperonin complex. component... 0.02 Archaeplastida
Pp3c24_12180V3.1 No alias chaperonin-60alpha 0.02 Archaeplastida
Pp3c27_5110V3.1 No alias chaperonin 60 beta 0.02 Archaeplastida
Pp3c6_20400V3.1 No alias chaperonin 60 beta 0.05 Archaeplastida
Pp3c8_16290V3.1 No alias chaperonin-60alpha 0.03 Archaeplastida
Smo168153 No alias External stimuli response.temperature.Hsp... 0.02 Archaeplastida
Solyc03g120850.4.1 No alias subunit beta of Cpn60 chaperonin complex. component... 0.06 Archaeplastida
Zm00001e001025_P002 No alias subunit beta of Cpn60 chaperonin complex. component... 0.04 Archaeplastida
Zm00001e031536_P001 No alias subunit alpha of Cpn60 chaperonin complex. component... 0.02 Archaeplastida
AT1G26230 No alias TCP-1/cpn60 chaperonin family protein 0.08 LandPlants
AT1G55490 CPN60B, LEN1 chaperonin 60 beta 0.04 LandPlants
ChrSy.fgenesh.mRNA.28 No alias subunit beta of Cpn60 chaperonin complex. component... 0.03 LandPlants
GSVIVT01010149001 No alias External stimuli response.temperature.Hsp... 0.03 LandPlants
Mp1g21640.1 No alias subunit beta of Cpn60 chaperonin complex. component... 0.01 LandPlants
Pp3c6_20400V3.1 No alias chaperonin 60 beta 0.04 LandPlants
Solyc03g120850.4.1 No alias subunit beta of Cpn60 chaperonin complex. component... 0.05 LandPlants
Zm00001e001025_P002 No alias subunit beta of Cpn60 chaperonin complex. component... 0.04 LandPlants
AT1G26230 No alias TCP-1/cpn60 chaperonin family protein 0.07 SeedPlants
AT1G55490 CPN60B, LEN1 chaperonin 60 beta 0.02 SeedPlants
ChrSy.fgenesh.mRNA.28 No alias subunit beta of Cpn60 chaperonin complex. component... 0.02 SeedPlants
GSVIVT01010149001 No alias External stimuli response.temperature.Hsp... 0.03 SeedPlants
Solyc03g120850.4.1 No alias subunit beta of Cpn60 chaperonin complex. component... 0.03 SeedPlants
Zm00001e001025_P002 No alias subunit beta of Cpn60 chaperonin complex. component... 0.04 SeedPlants

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0044267 cellular protein metabolic process IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002423 Cpn60/TCP-1 63 549
No external refs found!