Adi_g088258 (PVA12)


Aliases : PVA12

Description : contact site protein (VAP27) of ER-cytoskeleton-plasmamembrane interface & original description: none


Gene families : OG0000655 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000655_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g088258

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00086p00162440 VAP27, VAP27-1,... Vesicle-associated protein 1-1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT3G60600 VAP27, VAP27-1,... vesicle associated protein 0.03 OrthoFinder output from all 47 species
Adi_g024778 No alias contact site protein (VAP27) of... 0.03 OrthoFinder output from all 47 species
Aop_g02457 PVA12 contact site protein (VAP27) of... 0.03 OrthoFinder output from all 47 species
Aop_g62969 VAP27, VAP27-1,... contact site protein (VAP27) of... 0.02 OrthoFinder output from all 47 species
Ceric.39G059000.1 VAP27, VAP27-1,... contact site protein (VAP27) of... 0.03 OrthoFinder output from all 47 species
Cre03.g196900 VAP27, VAP27-1,... Vesicle-associated protein 1-1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Dac_g07429 PVA12 contact site protein (VAP27) of... 0.02 OrthoFinder output from all 47 species
LOC_Os10g40140.1 LOC_Os10g40140 contact site protein (VAP27) of... 0.02 OrthoFinder output from all 47 species
Len_g17263 VAP27, VAP27-1,... contact site protein (VAP27) of... 0.04 OrthoFinder output from all 47 species
Mp3g04340.1 PVA12 contact site protein (VAP27) of... 0.03 OrthoFinder output from all 47 species
Msp_g03861 PVA12 contact site protein (VAP27) of... 0.02 OrthoFinder output from all 47 species
Msp_g10884 PVA12 contact site protein (VAP27) of... 0.02 OrthoFinder output from all 47 species
Solyc01g090990.3.1 Solyc01g090990 contact site protein (VAP27) of... 0.02 OrthoFinder output from all 47 species
Spa_g06544 PVA12 contact site protein (VAP27) of... 0.05 OrthoFinder output from all 47 species
Tin_g02524 VAP27, VAP27-1,... contact site protein (VAP27) of... 0.07 OrthoFinder output from all 47 species
Zm00001e021734_P002 PVA12, Zm00001e021734 contact site protein (VAP27) of... 0.02 OrthoFinder output from all 47 species
Zm00001e040240_P001 Zm00001e040240 contact site protein (VAP27) of... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005787 signal peptidase complex IEP HCCA
BP GO:0006465 signal peptide processing IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008375 acetylglucosaminyltransferase activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016485 protein processing IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
CC GO:1905368 peptidase complex IEP HCCA
InterPro domains Description Start Stop
IPR000535 MSP_dom 6 109
No external refs found!