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  5. Adi_g088073

Adi_g088073 (APC2)


Aliases : APC2

Description : component *(APC2) of (APC/C)-dependent ubiquitination catalytic core subcomplex & original description: none


Gene families : OG0006038 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006038_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g088073

Target Alias Description ECC score Gene Family Method Actions
AT2G04660 APC2 anaphase-promoting complex/cyclosome 2 0.03 OrthoFinder output from all 47 species
Als_g16470 APC2 component *(APC2) of (APC/C)-dependent ubiquitination... 0.02 OrthoFinder output from all 47 species
LOC_Os04g40830.1 APC2, LOC_Os04g40830 component APC2 of (APC/C)-dependent ubiquitination... 0.02 OrthoFinder output from all 47 species
MA_97492g0010 APC2 component APC2 of (APC/C)-dependent ubiquitination... 0.02 OrthoFinder output from all 47 species
Mp2g16080.1 APC2 component APC2 of (APC/C)-dependent ubiquitination... 0.01 OrthoFinder output from all 47 species
Nbi_g12076 APC2 component *(APC2) of (APC/C)-dependent ubiquitination... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006511 ubiquitin-dependent protein catabolic process IEA Interproscan
MF GO:0031625 ubiquitin protein ligase binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP HCCA
MF GO:0000149 SNARE binding IEP HCCA
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0003916 DNA topoisomerase activity IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
MF GO:0005546 phosphatidylinositol-4,5-bisphosphate binding IEP HCCA
CC GO:0005694 chromosome IEP HCCA
BP GO:0006265 DNA topological change IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0006650 glycerophospholipid metabolic process IEP HCCA
BP GO:0006887 exocytosis IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
MF GO:0019905 syntaxin binding IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
BP GO:0046486 glycerolipid metabolic process IEP HCCA
BP GO:0046488 phosphatidylinositol metabolic process IEP HCCA
BP GO:0046903 secretion IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
BP GO:0140352 export from cell IEP HCCA
MF GO:1901981 phosphatidylinositol phosphate binding IEP HCCA
MF GO:1902936 phosphatidylinositol bisphosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR014786 APC2_C 917 974
IPR001373 Cullin_N 590 854
No external refs found!