1. Home
  2. Species
  3. Picea abies
  4. Sequence
  5. MA_1139g0010

MA_1139g0010


Description : C3H zinc finger transcription factor


Gene families : OG_01_0000421 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000421_tree ,
OG_02_0000820 (LandPlants) Phylogenetic Tree(s): OG_02_0000820_tree ,
OG_03_0001649 (SeedPlants) Phylogenetic Tree(s): OG_03_0001649_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_1139g0010
Cluster HCCA: Cluster_278

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00057p00193570 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C3H zinc... 0.04 Archaeplastida
AT1G29560 No alias Zinc finger C-x8-C-x5-C-x3-H type family protein 0.02 Archaeplastida
Gb_02527 No alias C3H zinc finger transcription factor 0.03 Archaeplastida
LOC_Os01g15460.1 No alias C3H zinc finger transcription factor 0.04 Archaeplastida
Zm00001e039538_P001 No alias C3H zinc finger transcription factor 0.02 Archaeplastida
AMTR_s00074p00110430 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C3H zinc... 0.02 SeedPlants
GSVIVT01019118001 No alias RNA biosynthesis.transcriptional activation.C3H zinc... 0.03 SeedPlants
Gb_32583 No alias C3H zinc finger transcription factor 0.04 SeedPlants
Gb_39550 No alias C3H zinc finger transcription factor 0.05 SeedPlants
MA_557223g0010 No alias C3H zinc finger transcription factor 0.04 SeedPlants

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000571 Znf_CCCH 145 170
IPR000571 Znf_CCCH 100 123
IPR000571 Znf_CCCH 58 82
No external refs found!