Description : chromatin remodeling factor *(ALC1) & original description: none
Gene families : OG0000102 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000102_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Aob_g29989 | PKR1, CHR4 | CHD3-type chromatin remodeling factor *(PKL/PKR) &... | 0.02 | OrthoFinder output from all 47 species | |
Aop_g13768 | PKL, GYM, CHR6,... | CHD3-type chromatin remodeling factor *(PKL/PKR) &... | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01012117001 | PKR1, CHR4 | RNA biosynthesis.transcriptional activation.PHD finger... | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01018218001 | No alias | Chromatin organisation.chromatin remodeling... | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os07g46590.1 | CHR5, LOC_Os07g46590 | chromatin remodeling factor (Chd1). component CHR5 of... | 0.03 | OrthoFinder output from all 47 species | |
Len_g08675 | PKR1, CHR4 | CHD3-type chromatin remodeling factor *(PKL/PKR) &... | 0.03 | OrthoFinder output from all 47 species | |
Mp3g15030.1 | CHR17 | chromatin remodeling factor (Iswi) | 0.01 | OrthoFinder output from all 47 species | |
Msp_g13221 | CHR17 | ATPase component *(CHR11/CHR17) of ISWI chromatin... | 0.03 | OrthoFinder output from all 47 species | |
Msp_g13222 | ATCHR12 | SMARCA component *(SYD/BRM/MINU) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Msp_g15462 | No alias | chromatin remodeling factor *(ALC1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ppi_g07635 | PKR1, CHR4 | CHD3-type chromatin remodeling factor *(PKL/PKR) &... | 0.02 | OrthoFinder output from all 47 species | |
Ppi_g17433 | ATCHR12 | SMARCA component *(SYD/BRM/MINU) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Sam_g14615 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005524 | ATP binding | IEA | Interproscan |
MF | GO:0140658 | ATP-dependent chromatin remodeler activity | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0006753 | nucleoside phosphate metabolic process | IEP | HCCA |
MF | GO:0008252 | nucleotidase activity | IEP | HCCA |
MF | GO:0008253 | 5'-nucleotidase activity | IEP | HCCA |
BP | GO:0009056 | catabolic process | IEP | HCCA |
BP | GO:0009117 | nucleotide metabolic process | IEP | HCCA |
BP | GO:0009166 | nucleotide catabolic process | IEP | HCCA |
BP | GO:0009262 | deoxyribonucleotide metabolic process | IEP | HCCA |
BP | GO:0009264 | deoxyribonucleotide catabolic process | IEP | HCCA |
MF | GO:0016791 | phosphatase activity | IEP | HCCA |
BP | GO:0019439 | aromatic compound catabolic process | IEP | HCCA |
BP | GO:0034655 | nucleobase-containing compound catabolic process | IEP | HCCA |
MF | GO:0042578 | phosphoric ester hydrolase activity | IEP | HCCA |
BP | GO:0044248 | cellular catabolic process | IEP | HCCA |
BP | GO:0044270 | cellular nitrogen compound catabolic process | IEP | HCCA |
BP | GO:0046434 | organophosphate catabolic process | IEP | HCCA |
BP | GO:0046700 | heterocycle catabolic process | IEP | HCCA |
BP | GO:1901136 | carbohydrate derivative catabolic process | IEP | HCCA |
BP | GO:1901292 | nucleoside phosphate catabolic process | IEP | HCCA |
BP | GO:1901361 | organic cyclic compound catabolic process | IEP | HCCA |
BP | GO:1901575 | organic substance catabolic process | IEP | HCCA |
No external refs found! |