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  5. Adi_g086684

Adi_g086684 (PIP1C, TMP-B, PIP1;3)


Aliases : PIP1C, TMP-B, PIP1;3

Description : plasma membrane intrinsic protein *(PIP) & original description: none


Gene families : OG0000095 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000095_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g086684

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00148p00023270 PIP2D, PIP2;5,... Solute transport.channels.MIP family.plasma membrane... 0.02 OrthoFinder output from all 47 species
Dde_g26467 PIP1A, PIP1;1,... plasma membrane intrinsic protein *(PIP) & original... 0.03 OrthoFinder output from all 47 species
Len_g30173 PIP1;5, PIP1D plasma membrane intrinsic protein *(PIP) & original... 0.03 OrthoFinder output from all 47 species
Smo266713 ATTIP2;1,... Solute transport.channels.MIP family.tonoplast intrinsic... 0.02 OrthoFinder output from all 47 species
Spa_g01521 PIP2;1, PIP2, PIP2A plasma membrane intrinsic protein *(PIP) & original... 0.03 OrthoFinder output from all 47 species
Zm00001e023197_P001 PIP1;5, PIP1D,... plasma membrane intrinsic protein (PIP) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0015267 channel activity IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006354 DNA-templated transcription elongation IEP HCCA
BP GO:0006368 transcription elongation by RNA polymerase II IEP HCCA
CC GO:0008023 transcription elongation factor complex IEP HCCA
BP GO:0016570 histone modification IEP HCCA
CC GO:0016593 Cdc73/Paf1 complex IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR000425 MIP 27 259
No external refs found!