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  5. Adi_g085938

Adi_g085938 (MED34, ATRECQ2, RECQL2)


Aliases : MED34, ATRECQ2, RECQL2

Description : component *(MED34) of MEDIATOR transcription co-activator complex & original description: none


Gene families : OG0000844 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000844_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g085938

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene10169.t1 ATRECQ4A,... helicase component *(RecQ4A) of RTR Holliday junction... 0.03 OrthoFinder output from all 47 species
Cba_g37588 RecQl3, ATRECQ3 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cre12.g502350 MED34, ATRECQ2, RECQL2 Mediator of RNA polymerase II transcription subunit 34... 0.01 OrthoFinder output from all 47 species
Dcu_g06356 MED34, ATRECQ2, RECQL2 component *(MED34) of MEDIATOR transcription... 0.03 OrthoFinder output from all 47 species
Dde_g43590 MED34, ATRECQ2, RECQL2 component *(MED34) of MEDIATOR transcription... 0.03 OrthoFinder output from all 47 species
Ehy_g14607 RECQI1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g31337 RECQI1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Mp4g14290.1 ATRECQ4A, ATSGS1, RECQ4A helicase component RecQ4A of RTR Holliday junction... 0.02 OrthoFinder output from all 47 species
Mp4g16510.1 RECQI1 ATP-dependent DNA helicase Q-like 1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Msp_g14824 RecQl3, ATRECQ3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g41299 RECQI1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g41947 MED34, ATRECQ2, RECQL2 component *(MED34) of MEDIATOR transcription... 0.03 OrthoFinder output from all 47 species
Sam_g49278 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g50849 No alias component *(MED34) of MEDIATOR transcription... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006260 DNA replication IEA Interproscan
BP GO:0006281 DNA repair IEA Interproscan
MF GO:0043138 3'-5' DNA helicase activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
InterPro domains Description Start Stop
IPR001650 Helicase_C 305 407
IPR011545 DEAD/DEAH_box_helicase_dom 93 259
IPR002121 HRDC_dom 609 671
IPR032284 RecQ_Zn-bd 420 475
IPR018982 RQC_domain 484 584
No external refs found!