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  5. Adi_g085912

Adi_g085912


Description : not classified & original description: none


Gene families : OG0000120 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000120_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g085912

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00049p00200350 evm_27.TU.AmTr_v1... Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Adi_g102181 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g08048 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g13552 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g08530 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g12260 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g16236 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0149.g053226 No alias not classified & original description: CDS=547-1935 0.04 OrthoFinder output from all 47 species
Azfi_s0704.g082656 No alias not classified & original description: CDS=748-2211 0.02 OrthoFinder output from all 47 species
Cba_g33385 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.04G042300.1 Ceric.04G042300 not classified & original description: pacid=50630995... 0.03 OrthoFinder output from all 47 species
Ceric.35G060600.1 Ceric.35G060600 not classified & original description: pacid=50581737... 0.03 OrthoFinder output from all 47 species
Cre12.g560300 No alias Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Dcu_g02961 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g06314 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g02282 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g07658 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01016872001 No alias Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01030040001 No alias Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Gb_33485 No alias Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Gb_35079 No alias Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Len_g08463 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g17314 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g19867 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g22115 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g04078 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_13606g0010 No alias Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_36839g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Nbi_g22584 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g35383 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g40736 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g44409 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g09717 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g17780 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g17528 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g29827 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g10456 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g15340 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g28907 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc12g014600.2.1 Solyc12g014600 Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Tin_g01925 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g07867 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g08507 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g20205 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e011415_P001 Zm00001e011415 Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Zm00001e033045_P001 Zm00001e033045 Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 111 169
IPR000504 RRM_dom 8 65
No external refs found!