1. Home
  2. Species
  3. Actinostachys digitata
  4. Sequence
  5. Adi_g085887

Adi_g085887 (WTF1, AtWTF1)


Aliases : WTF1, AtWTF1

Description : plastidial RNA basal splicing factor *(WTF1) & original description: none


Gene families : OG0001240 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001240_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g085887

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00268210 evm_27.TU.AmTr_v1... Protein WHATS THIS FACTOR 1 homolog OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00014p00229190 emb1692,... Protein WHATS THIS FACTOR 1 homolog OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00033p00133210 emb1692,... RNA processing.organelle machineries.RNA... 0.03 OrthoFinder output from all 47 species
AT4G01037 WTF1, AtWTF1 Ubiquitin carboxyl-terminal hydrolase family protein 0.02 OrthoFinder output from all 47 species
AT5G21970 No alias Ubiquitin carboxyl-terminal hydrolase family protein 0.04 OrthoFinder output from all 47 species
AT5G62990 emb1692 Ubiquitin carboxyl-terminal hydrolase family protein 0.06 OrthoFinder output from all 47 species
Adi_g113144 WTF1, AtWTF1 plastidial RNA basal splicing factor *(WTF1) & original... 0.05 OrthoFinder output from all 47 species
Als_g22428 WTF1, AtWTF1 plastidial RNA basal splicing factor *(WTF1) & original... 0.04 OrthoFinder output from all 47 species
Aop_g29986 WTF1, AtWTF1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01027077001 WTF1, AtWTF1 RNA processing.organelle machineries.RNA... 0.03 OrthoFinder output from all 47 species
Gb_07993 WTF1, AtWTF1 WTF1 plastidial RNA basal splicing factor 0.03 OrthoFinder output from all 47 species
Ore_g06540 WTF1, AtWTF1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g10310 WTF1, AtWTF1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e000591_P002 Zm00001e000591 Protein WHATS THIS FACTOR 1 homolog OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
Zm00001e026570_P001 WTF1, AtWTF1,... WTF1 plastidial RNA basal splicing factor 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR021099 PORR_domain 75 404
No external refs found!