Adi_g085792 (BP, BP1, KNAT1)

Aliases : BP, BP1, KNAT1

Description : KNOX-type transcription factor & original description: none

Gene families : OG0000252 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000252_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Adi_g085792

Target	Alias	Description	ECC score	Gene Family Method
AT1G70510	KNAT2, ATK1	KNOTTED-like from Arabidopsis thaliana 2	0.03	OrthoFinder output from all 47 species
Aspi01Gene63434.t1	KNAT4, Aspi01Gene63434	KNOX-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Azfi_s0022.g016023	KNAT6, KNAT6L, KNAT6S	not classified & original description: CDS=247-1020	0.03	OrthoFinder output from all 47 species
Cba_g05770	KNAT4	KNOX-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Dac_g27227	BUM1, SHL, STM,...	KNOX-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Gb_00573	BUM1, SHL, STM,...	transcription factor (KNOX)	0.03	OrthoFinder output from all 47 species
LOC_Os01g19694.1	KNAT6, KNAT6L,...	transcription factor (KNOX)	0.02	OrthoFinder output from all 47 species
LOC_Os05g03884.1	KNAT6, KNAT6L,...	transcription factor (KNOX)	0.02	OrthoFinder output from all 47 species
Lfl_g05424	KNAT3	KNOX-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g24721	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Pnu_g02102	KNAT3	KNOX-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Pnu_g20569	KNAT3	KNOX-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	Interproscan
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR008422	Homeobox_KN_domain	422	446
IPR005541	KNOX2	256	301
IPR005540	KNOX1	200	240

External Links

No external refs found!