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  5. Adi_g085549

Adi_g085549


Description : E3 ubiquitin ligase & original description: none


Gene families : OG0000370 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000370_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g085549

Target Alias Description ECC score Gene Family Method Actions
Adi_g009055 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0123.g048411 No alias E3 ubiquitin ligase & original description: CDS=249-1382 0.02 OrthoFinder output from all 47 species
Ceric.1Z147500.1 Ceric.1Z147500 E3 ubiquitin ligase & original description:... 0.02 OrthoFinder output from all 47 species
Cre17.g747747 No alias No description available 0.02 OrthoFinder output from all 47 species
LOC_Os09g24650.2 LOC_Os09g24650 RING-v-class E3 ligase 0.03 OrthoFinder output from all 47 species
Lfl_g41103 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g09866 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g01567 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e021220_P001 Zm00001e021220 RING-v-class E3 ligase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
InterPro domains Description Start Stop
IPR022143 DUF3675 125 238
IPR011016 Znf_RING-CH 73 118
No external refs found!