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  5. Adi_g085387

Adi_g085387


Description : E3 ubiquitin ligase *(LOG2/LUL) & original description: none


Gene families : OG0000967 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000967_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g085387

Target Alias Description ECC score Gene Family Method Actions
AT5G19080 No alias RING/U-box superfamily protein 0.03 OrthoFinder output from all 47 species
Ceric.09G086300.1 Ceric.09G086300 E3 ubiquitin ligase *(LOG2/LUL) & original description:... 0.03 OrthoFinder output from all 47 species
GSVIVT01000020001 No alias Probable E3 ubiquitin-protein ligase LUL3 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Len_g01692 No alias E3 ubiquitin ligase *(LOG2/LUL) & original description: none 0.03 OrthoFinder output from all 47 species
Len_g02259 No alias E3 ubiquitin ligase *(LOG2/LUL) & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g05278 No alias E3 ubiquitin ligase *(LOG2/LUL) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g00968 No alias E3 ubiquitin ligase *(LOG2/LUL) & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0059.g015098 No alias E3 ubiquitin ligase *(LOG2/LUL) & original description: CDS=1-966 0.02 OrthoFinder output from all 47 species
Sam_g38167 No alias E3 ubiquitin ligase *(LOG2/LUL) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g098750.3.1 Solyc01g098750 Probable E3 ubiquitin-protein ligase LUL4 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0007275 multicellular organism development IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
MF GO:0015299 obsolete solute:proton antiporter activity IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
BP GO:0032501 multicellular organismal process IEP HCCA
BP GO:0032502 developmental process IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0048856 anatomical structure development IEP HCCA
MF GO:0050661 NADP binding IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!