Ehy_g16256 (STM, SHM1, SHMT1)


Aliases : STM, SHM1, SHMT1

Description : EC_2.1 transferase transferring one-carbon group & original description: none


Gene families : OG0000990 (OrthoFinder output from all 39 species) Phylogenetic Tree(s): OG0000990_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ehy_g16256

Target Alias Description ECC score Gene Family Method Actions
Adi_g035671 STM, SHM1, SHMT1 EC_2.1 transferase transferring one-carbon group &... 0.01 OrthoFinder output from all 39 species
Adi_g081286 STM, SHM1, SHMT1 EC_2.1 transferase transferring one-carbon group &... 0.01 OrthoFinder output from all 39 species
Aev_g09895 STM, SHM1, SHMT1 EC_2.1 transferase transferring one-carbon group &... 0.01 OrthoFinder output from all 39 species
Aev_g16029 No alias not classified & original description: none 0.01 OrthoFinder output from all 39 species
Ala_g06687 STM, SHM1, SHMT1 not classified & original description: none 0.01 OrthoFinder output from all 39 species
Ala_g06688 STM, SHM1, SHMT1 EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 39 species
Als_g06300 STM, SHM1, SHMT1 EC_2.1 transferase transferring one-carbon group &... 0.04 OrthoFinder output from all 39 species
Aob_g16059 STM, SHM1, SHMT1 EC_2.1 transferase transferring one-carbon group &... 0.02 OrthoFinder output from all 39 species
Aop_g11376 STM, SHM1, SHMT1 EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 39 species
Aspi01Gene56437.t1 STM, SHM1,... EC_2.1 transferase transferring one-carbon group &... 0.01 OrthoFinder output from all 39 species
Azfi_s0102.g044437 STM, SHM1, SHMT1 EC_2.1 transferase transferring one-carbon group &... 0.02 OrthoFinder output from all 39 species
Cba_g12674 STM, SHM1, SHMT1 EC_2.1 transferase transferring one-carbon group &... 0.02 OrthoFinder output from all 39 species
Ceric.28G027700.1 STM, SHM1,... EC_2.1 transferase transferring one-carbon group &... 0.06 OrthoFinder output from all 39 species
Dac_g28484 STM, SHM1, SHMT1 EC_2.1 transferase transferring one-carbon group &... 0.01 OrthoFinder output from all 39 species
Dcu_g14509 SHM2 not classified & original description: none 0.01 OrthoFinder output from all 39 species
Dcu_g14554 STM, SHM1, SHMT1 EC_2.1 transferase transferring one-carbon group &... 0.01 OrthoFinder output from all 39 species
Dcu_g21464 STM, SHM1, SHMT1 EC_2.1 transferase transferring one-carbon group &... 0.01 OrthoFinder output from all 39 species
Dcu_g49354 SHM2 serine hydroxymethyltransferase *(SHM) & original... 0.01 OrthoFinder output from all 39 species
Dde_g20927 STM, SHM1, SHMT1 EC_2.1 transferase transferring one-carbon group &... 0.02 OrthoFinder output from all 39 species
Len_g12401 STM, SHM1, SHMT1 EC_2.1 transferase transferring one-carbon group &... 0.04 OrthoFinder output from all 39 species
Lfl_g04055 STM, SHM1, SHMT1 EC_2.1 transferase transferring one-carbon group &... 0.02 OrthoFinder output from all 39 species
Mp2g08370.1 STM, SHM1, SHMT1 serine hydroxymethyltransferase 0.01 OrthoFinder output from all 39 species
Msp_g48544 STM, SHM1, SHMT1 EC_2.1 transferase transferring one-carbon group &... 0.05 OrthoFinder output from all 39 species
Nbi_g03063 STM, SHM1, SHMT1 EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 39 species
Ore_g09056 STM, SHM1, SHMT1 EC_2.1 transferase transferring one-carbon group &... 0.02 OrthoFinder output from all 39 species
Pp3c1_27990V3.1 STM, SHM1,... serine transhydroxymethyltransferase 1 0.01 OrthoFinder output from all 39 species
Smo270566 STM, SHM1, SHMT1 Photosynthesis.photorespiration.serine hydroxymethyltransferase 0.02 OrthoFinder output from all 39 species
Tin_g10060 STM, SHM1, SHMT1 EC_2.1 transferase transferring one-carbon group &... 0.04 OrthoFinder output from all 39 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006754 ATP biosynthetic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
BP GO:0015986 proton motive force-driven ATP synthesis IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016854 racemase and epimerase activity IEP HCCA
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
MF GO:0071949 FAD binding IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR039429 SHMT-like_dom 55 451
No external refs found!