Aliases : STM, SHM1, SHMT1
Description : EC_2.1 transferase transferring one-carbon group & original description: none
Gene families : OG0000990 (OrthoFinder output from all 39 species) Phylogenetic Tree(s): OG0000990_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Adi_g035671 | STM, SHM1, SHMT1 | EC_2.1 transferase transferring one-carbon group &... | 0.01 | OrthoFinder output from all 39 species | |
Adi_g081286 | STM, SHM1, SHMT1 | EC_2.1 transferase transferring one-carbon group &... | 0.01 | OrthoFinder output from all 39 species | |
Aev_g09895 | STM, SHM1, SHMT1 | EC_2.1 transferase transferring one-carbon group &... | 0.01 | OrthoFinder output from all 39 species | |
Aev_g16029 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 39 species | |
Ala_g06687 | STM, SHM1, SHMT1 | not classified & original description: none | 0.01 | OrthoFinder output from all 39 species | |
Ala_g06688 | STM, SHM1, SHMT1 | EC_2.1 transferase transferring one-carbon group &... | 0.03 | OrthoFinder output from all 39 species | |
Als_g06300 | STM, SHM1, SHMT1 | EC_2.1 transferase transferring one-carbon group &... | 0.04 | OrthoFinder output from all 39 species | |
Aob_g16059 | STM, SHM1, SHMT1 | EC_2.1 transferase transferring one-carbon group &... | 0.02 | OrthoFinder output from all 39 species | |
Aop_g11376 | STM, SHM1, SHMT1 | EC_2.1 transferase transferring one-carbon group &... | 0.03 | OrthoFinder output from all 39 species | |
Aspi01Gene56437.t1 | STM, SHM1,... | EC_2.1 transferase transferring one-carbon group &... | 0.01 | OrthoFinder output from all 39 species | |
Azfi_s0102.g044437 | STM, SHM1, SHMT1 | EC_2.1 transferase transferring one-carbon group &... | 0.02 | OrthoFinder output from all 39 species | |
Cba_g12674 | STM, SHM1, SHMT1 | EC_2.1 transferase transferring one-carbon group &... | 0.02 | OrthoFinder output from all 39 species | |
Ceric.28G027700.1 | STM, SHM1,... | EC_2.1 transferase transferring one-carbon group &... | 0.06 | OrthoFinder output from all 39 species | |
Dac_g28484 | STM, SHM1, SHMT1 | EC_2.1 transferase transferring one-carbon group &... | 0.01 | OrthoFinder output from all 39 species | |
Dcu_g14509 | SHM2 | not classified & original description: none | 0.01 | OrthoFinder output from all 39 species | |
Dcu_g14554 | STM, SHM1, SHMT1 | EC_2.1 transferase transferring one-carbon group &... | 0.01 | OrthoFinder output from all 39 species | |
Dcu_g21464 | STM, SHM1, SHMT1 | EC_2.1 transferase transferring one-carbon group &... | 0.01 | OrthoFinder output from all 39 species | |
Dcu_g49354 | SHM2 | serine hydroxymethyltransferase *(SHM) & original... | 0.01 | OrthoFinder output from all 39 species | |
Dde_g20927 | STM, SHM1, SHMT1 | EC_2.1 transferase transferring one-carbon group &... | 0.02 | OrthoFinder output from all 39 species | |
Len_g12401 | STM, SHM1, SHMT1 | EC_2.1 transferase transferring one-carbon group &... | 0.04 | OrthoFinder output from all 39 species | |
Lfl_g04055 | STM, SHM1, SHMT1 | EC_2.1 transferase transferring one-carbon group &... | 0.02 | OrthoFinder output from all 39 species | |
Mp2g08370.1 | STM, SHM1, SHMT1 | serine hydroxymethyltransferase | 0.01 | OrthoFinder output from all 39 species | |
Msp_g48544 | STM, SHM1, SHMT1 | EC_2.1 transferase transferring one-carbon group &... | 0.05 | OrthoFinder output from all 39 species | |
Nbi_g03063 | STM, SHM1, SHMT1 | EC_2.1 transferase transferring one-carbon group &... | 0.03 | OrthoFinder output from all 39 species | |
Ore_g09056 | STM, SHM1, SHMT1 | EC_2.1 transferase transferring one-carbon group &... | 0.02 | OrthoFinder output from all 39 species | |
Pp3c1_27990V3.1 | STM, SHM1,... | serine transhydroxymethyltransferase 1 | 0.01 | OrthoFinder output from all 39 species | |
Smo270566 | STM, SHM1, SHMT1 | Photosynthesis.photorespiration.serine hydroxymethyltransferase | 0.02 | OrthoFinder output from all 39 species | |
Tin_g10060 | STM, SHM1, SHMT1 | EC_2.1 transferase transferring one-carbon group &... | 0.04 | OrthoFinder output from all 39 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000166 | nucleotide binding | IEP | HCCA |
MF | GO:0003674 | molecular_function | IEP | HCCA |
MF | GO:0003824 | catalytic activity | IEP | HCCA |
MF | GO:0003924 | GTPase activity | IEP | HCCA |
MF | GO:0005488 | binding | IEP | HCCA |
MF | GO:0005525 | GTP binding | IEP | HCCA |
BP | GO:0005975 | carbohydrate metabolic process | IEP | HCCA |
BP | GO:0006164 | purine nucleotide biosynthetic process | IEP | HCCA |
BP | GO:0006352 | DNA-templated transcription initiation | IEP | HCCA |
BP | GO:0006754 | ATP biosynthetic process | IEP | HCCA |
BP | GO:0009058 | biosynthetic process | IEP | HCCA |
BP | GO:0009142 | nucleoside triphosphate biosynthetic process | IEP | HCCA |
BP | GO:0009145 | purine nucleoside triphosphate biosynthetic process | IEP | HCCA |
BP | GO:0009152 | purine ribonucleotide biosynthetic process | IEP | HCCA |
BP | GO:0009165 | nucleotide biosynthetic process | IEP | HCCA |
BP | GO:0009201 | ribonucleoside triphosphate biosynthetic process | IEP | HCCA |
BP | GO:0009206 | purine ribonucleoside triphosphate biosynthetic process | IEP | HCCA |
BP | GO:0009260 | ribonucleotide biosynthetic process | IEP | HCCA |
BP | GO:0015986 | proton motive force-driven ATP synthesis | IEP | HCCA |
MF | GO:0016301 | kinase activity | IEP | HCCA |
MF | GO:0016462 | pyrophosphatase activity | IEP | HCCA |
MF | GO:0016491 | oxidoreductase activity | IEP | HCCA |
MF | GO:0016651 | oxidoreductase activity, acting on NAD(P)H | IEP | HCCA |
MF | GO:0016655 | oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | IEP | HCCA |
MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | HCCA |
MF | GO:0016817 | hydrolase activity, acting on acid anhydrides | IEP | HCCA |
MF | GO:0016818 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | IEP | HCCA |
MF | GO:0016854 | racemase and epimerase activity | IEP | HCCA |
MF | GO:0016857 | racemase and epimerase activity, acting on carbohydrates and derivatives | IEP | HCCA |
MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
MF | GO:0017111 | ribonucleoside triphosphate phosphatase activity | IEP | HCCA |
BP | GO:0018130 | heterocycle biosynthetic process | IEP | HCCA |
MF | GO:0019001 | guanyl nucleotide binding | IEP | HCCA |
BP | GO:0019438 | aromatic compound biosynthetic process | IEP | HCCA |
MF | GO:0019842 | vitamin binding | IEP | HCCA |
MF | GO:0030170 | pyridoxal phosphate binding | IEP | HCCA |
MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
MF | GO:0032561 | guanyl ribonucleotide binding | IEP | HCCA |
CC | GO:0033177 | proton-transporting two-sector ATPase complex, proton-transporting domain | IEP | HCCA |
BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | HCCA |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
MF | GO:0036094 | small molecule binding | IEP | HCCA |
MF | GO:0043167 | ion binding | IEP | HCCA |
MF | GO:0043168 | anion binding | IEP | HCCA |
CC | GO:0045263 | proton-transporting ATP synthase complex, coupling factor F(o) | IEP | HCCA |
BP | GO:0046390 | ribose phosphate biosynthetic process | IEP | HCCA |
MF | GO:0050660 | flavin adenine dinucleotide binding | IEP | HCCA |
MF | GO:0051536 | iron-sulfur cluster binding | IEP | HCCA |
MF | GO:0051540 | metal cluster binding | IEP | HCCA |
MF | GO:0070279 | vitamin B6 binding | IEP | HCCA |
MF | GO:0071949 | FAD binding | IEP | HCCA |
BP | GO:0072522 | purine-containing compound biosynthetic process | IEP | HCCA |
MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
BP | GO:1901293 | nucleoside phosphate biosynthetic process | IEP | HCCA |
BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | HCCA |
MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR039429 | SHMT-like_dom | 55 | 451 |
No external refs found! |