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  5. Adi_g084654

Adi_g084654


Description : MRM2-type rRNA methyltransferase & original description: none


Gene families : OG0004018 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004018_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g084654

Target Alias Description ECC score Gene Family Method Actions
AT4G25730 No alias FtsJ-like methyltransferase family protein 0.02 OrthoFinder output from all 47 species
Aob_g22298 No alias MRM2-type rRNA methyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g03927 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Cre12.g529500 No alias No description available 0.02 OrthoFinder output from all 47 species
GSVIVT01023801001 No alias No description available 0.04 OrthoFinder output from all 47 species
LOC_Os05g49230.1 LOC_Os05g49230 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Ore_g20920 No alias MRM2-type rRNA methyltransferase & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g11085 No alias MRM2-type rRNA methyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Smo141188 No alias No description available 0.03 OrthoFinder output from all 47 species
Smo78506 No alias No description available 0.03 OrthoFinder output from all 47 species
Solyc11g020810.2.1 Solyc11g020810 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e026556_P001 Zm00001e026556 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e032456_P001 Zm00001e032456 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEA Interproscan
BP GO:0006364 rRNA processing IEA Interproscan
MF GO:0008168 methyltransferase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
CC GO:0000428 DNA-directed RNA polymerase complex IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004527 exonuclease activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005666 RNA polymerase III complex IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006383 transcription by RNA polymerase III IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
CC GO:0030880 RNA polymerase complex IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
CC GO:0055029 nuclear DNA-directed RNA polymerase complex IEP HCCA
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR002877 RNA_MeTrfase_FtsJ_dom 24 203
IPR012920 rRNA_MeTfrase_SPB1-like_C 615 804
IPR024576 rRNA_MeTfrase_Spb1_DUF3381 236 384
No external refs found!