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  5. Ehy_g16196

Ehy_g16196 (RAB1C, ATRAB1C, ATRABD2C)


Aliases : RAB1C, ATRAB1C, ATRABD2C

Description : not classified & original description: none


Gene families : OG0004144 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004144_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ehy_g16196

Target Alias Description ECC score Gene Family Method Actions
Adi_g054189 ATFP8, RABD1, ATRABD1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g45463 ATRAB ALPHA,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g33799 ATRAB18,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g08033 ATRABB1B,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g20261 ATRABE1C,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g21252 RAB2A, AT-RAB2,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g51645 AtRABA5a, RABA5a not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005840 ribosome IEP HCCA
CC GO:0005861 troponin complex IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001806 Small_GTPase 1 115
No external refs found!