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  5. Adi_g084143

Adi_g084143


Description : not classified & original description: none


Gene families : OG0004459 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004459_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g084143

Target Alias Description ECC score Gene Family Method Actions
Aob_g13184 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene59649.t1 Aspi01Gene59649 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene59653.t1 Aspi01Gene59653 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0017.g014511 No alias not classified & original description: CDS=1-3180 0.03 OrthoFinder output from all 47 species
Ceric.29G067000.1 Ceric.29G067000 not classified & original description: pacid=50625433... 0.04 OrthoFinder output from all 47 species
Dcu_g38756 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g07040 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01027871001 No alias Splicing factor U2af large subunit A OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_32245 No alias Splicing factor U2af large subunit A OS=Triticum... 0.04 OrthoFinder output from all 47 species
LOC_Os01g72650.1 LOC_Os01g72650 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os03g04520.2 LOC_Os03g04520 Splicing factor U2af large subunit B OS=Nicotiana... 0.05 OrthoFinder output from all 47 species
Len_g40049 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g19439 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g24444 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e038951_P001 Zm00001e038951 Splicing factor U2af large subunit A OS=Nicotiana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!