MA_11231g0010


Description : no hits & (original description: none)


Gene families : OG_01_0000491 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000491_tree ,
OG_02_0000417 (LandPlants) Phylogenetic Tree(s): OG_02_0000417_tree ,
OG_03_0015709 (SeedPlants) Phylogenetic Tree(s): OG_03_0015709_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_11231g0010
Cluster HCCA: Cluster_216

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00264270 evm_27.TU.AmTr_v1... Chromatin organisation.histones.H1 linker histone 0.02 Archaeplastida
AT1G06760 No alias winged-helix DNA-binding transcription factor family protein 0.02 Archaeplastida
Cre13.g567450 No alias Chromatin organisation.histones.H1 linker histone 0.02 Archaeplastida
Gb_02738 No alias linker histone (H1) 0.02 Archaeplastida
Gb_40200 No alias linker histone (H1) 0.02 Archaeplastida
LOC_Os04g18090.1 No alias linker histone (H1) 0.02 Archaeplastida
MA_173054g0010 No alias linker histone (H1) 0.03 Archaeplastida
Mp6g03150.1 No alias linker histone (H1) 0.02 Archaeplastida
AMTR_s00057p00112340 evm_27.TU.AmTr_v1... Chromatin organisation.histones.H1 linker histone 0.02 LandPlants
Gb_02738 No alias linker histone (H1) 0.02 LandPlants
Gb_40200 No alias linker histone (H1) 0.02 LandPlants
LOC_Os04g18090.1 No alias linker histone (H1) 0.02 LandPlants
MA_173054g0010 No alias linker histone (H1) 0.04 LandPlants
Mp6g03150.1 No alias linker histone (H1) 0.02 LandPlants
Zm00001e007189_P001 No alias linker histone (H1) 0.02 LandPlants

Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEA Interproscan
MF GO:0003677 DNA binding IEA Interproscan
BP GO:0006334 nucleosome assembly IEA Interproscan
CC GO:0042025 host cell nucleus IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR005818 Histone_H1/H5_H15 20 64
No external refs found!