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Aliases : SYCO ARATH
Description : EC_6.1 ligase forming carbon-oxygen bond & original description: none
Gene families : OG0003986 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003986_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Adi_g082887 | |
| Cluster | HCCA: Cluster_281 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00033p00195130 | SYCO ARATH,... | Protein biosynthesis.aminoacyl-tRNA synthetase... | 0.04 | OrthoFinder output from all 47 species | |
| AT2G31170 | SYCO ARATH | Cysteinyl-tRNA synthetase, class Ia family protein | 0.04 | OrthoFinder output from all 47 species | |
| Aev_g02406 | SYCO ARATH | EC_6.1 ligase forming carbon-oxygen bond & original... | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0001.g000657 | SYCO ARATH | EC_6.1 ligase forming carbon-oxygen bond & original... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.01G085100.1 | SYCO ARATH,... | EC_6.1 ligase forming carbon-oxygen bond & original... | 0.04 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00020703.23 | SYCO ARATH | Protein biosynthesis.aminoacyl-tRNA synthetase... | 0.02 | OrthoFinder output from all 47 species | |
| Cre01.g069472 | SYCO ARATH | Protein biosynthesis.aminoacyl-tRNA synthetase... | 0.01 | OrthoFinder output from all 47 species | |
| Dcu_g13749 | SYCO ARATH | EC_6.1 ligase forming carbon-oxygen bond & original... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_40720 | SYCO ARATH | cysteine-tRNA ligase | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os09g38420.1 | SYCO ARATH,... | cysteine-tRNA ligase | 0.04 | OrthoFinder output from all 47 species | |
| MA_10431763g0010 | SYCO ARATH | cysteine-tRNA ligase | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g07698 | SYCO ARATH | EC_6.1 ligase forming carbon-oxygen bond & original... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g10055 | No alias | EC_6.1 ligase forming carbon-oxygen bond & original... | 0.04 | OrthoFinder output from all 47 species | |
| Smo119009 | SYCO ARATH | Protein biosynthesis.aminoacyl-tRNA synthetase... | 0.04 | OrthoFinder output from all 47 species | |
| Solyc04g076390.3.1 | SYCO ARATH,... | cysteine-tRNA ligase | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003824 | catalytic activity | IEP | HCCA |
| BP | GO:0005984 | disaccharide metabolic process | IEP | HCCA |
| BP | GO:0005991 | trehalose metabolic process | IEP | HCCA |
| BP | GO:0005992 | trehalose biosynthetic process | IEP | HCCA |
| BP | GO:0009311 | oligosaccharide metabolic process | IEP | HCCA |
| BP | GO:0009312 | oligosaccharide biosynthetic process | IEP | HCCA |
| MF | GO:0016627 | oxidoreductase activity, acting on the CH-CH group of donors | IEP | HCCA |
| MF | GO:0016887 | ATP hydrolysis activity | IEP | HCCA |
| BP | GO:0034637 | cellular carbohydrate biosynthetic process | IEP | HCCA |
| BP | GO:0042558 | pteridine-containing compound metabolic process | IEP | HCCA |
| BP | GO:0046351 | disaccharide biosynthetic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR032678 | tRNA-synt_1_cat_dom | 77 | 373 |
| No external refs found! |