Adi_g082409

Description : component *(uL14) of large ribosomal-subunit (LSU) proteome & original description: none

Gene families : OG0001634 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001634_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Adi_g082409
Cluster	HCCA: Cluster_316

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00067p00206470	evm_27.TU.AmTr_v1...	Protein biosynthesis.cytosolic ribosome.large subunit...	0.06	OrthoFinder output from all 47 species
AT2G33370	No alias	Ribosomal protein L14p/L23e family protein	0.05	OrthoFinder output from all 47 species
AT3G04400	emb2171	Ribosomal protein L14p/L23e family protein	0.04	OrthoFinder output from all 47 species
Ala_g22432	No alias	component *(uL14) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Als_g07889	No alias	component *(uL14) of large ribosomal-subunit (LSU)...	0.01	OrthoFinder output from all 47 species
Als_g42631	No alias	component *(uL14) of large ribosomal-subunit (LSU)...	0.01	OrthoFinder output from all 47 species
Aob_g05420	No alias	component *(uL14) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
Azfi_s0509.g074710	No alias	component *(uL14) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
Ceric.06G080000.1	Ceric.06G080000	component *(uL14) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Ceric.06G080100.1	Ceric.06G080100	component *(uL14) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Ceric.14G092400.1	Ceric.14G092400	component *(uL14) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00021290.9	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.05	OrthoFinder output from all 47 species
Cre04.g211800	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.05	OrthoFinder output from all 47 species
Dac_g25948	No alias	component *(uL14) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Dac_g34723	No alias	component *(uL14) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Dcu_g45777	No alias	component *(uL14) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
GSVIVT01027905001	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.02	OrthoFinder output from all 47 species
GSVIVT01028407001	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.06	OrthoFinder output from all 47 species
Gb_21541	No alias	component RPL23 of LSU proteome component	0.04	OrthoFinder output from all 47 species
LOC_Os02g56960.1	LOC_Os02g56960	component RPL23 of LSU proteome component	0.07	OrthoFinder output from all 47 species
LOC_Os03g04590.1	LOC_Os03g04590	component RPL23 of LSU proteome component	0.06	OrthoFinder output from all 47 species
LOC_Os10g32920.1	LOC_Os10g32920	component RPL23 of LSU proteome component	0.03	OrthoFinder output from all 47 species
Len_g49504	No alias	component *(uL14) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
MA_10432200g0010	No alias	component RPL23 of LSU proteome component	0.04	OrthoFinder output from all 47 species
MA_950121g0010	No alias	component RPL23 of LSU proteome component	0.02	OrthoFinder output from all 47 species
Mp6g14310.1	No alias	component RPL23 of LSU proteome component	0.03	OrthoFinder output from all 47 species
Msp_g22572	No alias	component *(uL14) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Msp_g36494	No alias	component *(uL14) of large ribosomal-subunit (LSU)...	0.01	OrthoFinder output from all 47 species
Pp3c23_4520V3.1	Pp3c23_4520	Ribosomal protein L14p/L23e family protein	0.02	OrthoFinder output from all 47 species
Pp3c27_860V3.1	Pp3c27_860	Ribosomal protein L14p/L23e family protein	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0070.g016759	No alias	component *(uL14) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
Sam_g11546	No alias	component *(uL14) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Sam_g47118	No alias	component *(uL14) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
Smo165708	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.05	OrthoFinder output from all 47 species
Solyc06g008170.3.1	Solyc06g008170	component RPL23 of LSU proteome component	0.03	OrthoFinder output from all 47 species
Solyc06g083780.3.1	Solyc06g083780	component RPL23 of LSU proteome component	0.06	OrthoFinder output from all 47 species
Solyc09g072865.1.1	Solyc09g072865	component RPL23 of LSU proteome component	0.05	OrthoFinder output from all 47 species
Solyc09g090610.3.1	Solyc09g090610	component RPL23 of LSU proteome component	0.03	OrthoFinder output from all 47 species
Spa_g08149	No alias	component *(uL14) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
Spa_g17111	No alias	component *(uL14) of large ribosomal-subunit (LSU)...	0.05	OrthoFinder output from all 47 species
Spa_g21229	No alias	component *(uL14) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Spa_g52019	No alias	component *(uL14) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
Tin_g03689	No alias	component *(uL14) of large ribosomal-subunit (LSU)...	0.08	OrthoFinder output from all 47 species
Tin_g26632	No alias	component *(uL14) of large ribosomal-subunit (LSU)...	0.05	OrthoFinder output from all 47 species
Zm00001e000323_P001	Zm00001e000323	component RPL23 of LSU proteome component	0.04	OrthoFinder output from all 47 species
Zm00001e023614_P001	Zm00001e023614	component RPL23 of LSU proteome component	0.04	OrthoFinder output from all 47 species
Zm00001e038953_P001	Zm00001e038953	component RPL23 of LSU proteome component	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003743	translation initiation factor activity	IEP	HCCA
MF	GO:0003746	translation elongation factor activity	IEP	HCCA
MF	GO:0003779	actin binding	IEP	HCCA
BP	GO:0006413	translational initiation	IEP	HCCA
BP	GO:0006417	regulation of translation	IEP	HCCA
BP	GO:0006448	regulation of translational elongation	IEP	HCCA
BP	GO:0006449	regulation of translational termination	IEP	HCCA
MF	GO:0008135	translation factor activity, RNA binding	IEP	HCCA
BP	GO:0009891	positive regulation of biosynthetic process	IEP	HCCA
BP	GO:0009893	positive regulation of metabolic process	IEP	HCCA
BP	GO:0010557	positive regulation of macromolecule biosynthetic process	IEP	HCCA
BP	GO:0010604	positive regulation of macromolecule metabolic process	IEP	HCCA
BP	GO:0010608	post-transcriptional regulation of gene expression	IEP	HCCA
BP	GO:0010628	positive regulation of gene expression	IEP	HCCA
MF	GO:0015095	magnesium ion transmembrane transporter activity	IEP	HCCA
BP	GO:0015693	magnesium ion transport	IEP	HCCA
MF	GO:0016872	intramolecular lyase activity	IEP	HCCA
BP	GO:0030001	metal ion transport	IEP	HCCA
BP	GO:0031325	positive regulation of cellular metabolic process	IEP	HCCA
BP	GO:0031328	positive regulation of cellular biosynthetic process	IEP	HCCA
BP	GO:0034248	regulation of amide metabolic process	IEP	HCCA
BP	GO:0034250	positive regulation of amide metabolic process	IEP	HCCA
MF	GO:0043021	ribonucleoprotein complex binding	IEP	HCCA
MF	GO:0043022	ribosome binding	IEP	HCCA
BP	GO:0043243	positive regulation of protein-containing complex disassembly	IEP	HCCA
BP	GO:0043244	regulation of protein-containing complex disassembly	IEP	HCCA
MF	GO:0044877	protein-containing complex binding	IEP	HCCA
MF	GO:0045182	translation regulator activity	IEP	HCCA
BP	GO:0045727	positive regulation of translation	IEP	HCCA
BP	GO:0045901	positive regulation of translational elongation	IEP	HCCA
BP	GO:0045905	positive regulation of translational termination	IEP	HCCA
MF	GO:0046873	metal ion transmembrane transporter activity	IEP	HCCA
BP	GO:0048518	positive regulation of biological process	IEP	HCCA
BP	GO:0048522	positive regulation of cellular process	IEP	HCCA
BP	GO:0051128	regulation of cellular component organization	IEP	HCCA
BP	GO:0051130	positive regulation of cellular component organization	IEP	HCCA
BP	GO:0051173	positive regulation of nitrogen compound metabolic process	IEP	HCCA
BP	GO:0051246	regulation of protein metabolic process	IEP	HCCA
BP	GO:0051247	positive regulation of protein metabolic process	IEP	HCCA
MF	GO:0090079	translation regulator activity, nucleic acid binding	IEP	HCCA
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000218	Ribosomal_L14P	59	177

External Links

No external refs found!

Adi_g082409

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation