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Aliases : STM, SHM1, SHMT1
Description : EC_2.1 transferase transferring one-carbon group & original description: none
Gene families : OG0000518 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000518_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00046p00219150 | STM, SHM1,... | Photosynthesis.photorespiration.serine hydroxymethyltransferase | 0.05 | OrthoFinder output from all 47 species | |
| AT4G37930 | STM, SHM1, SHMT1 | serine transhydroxymethyltransferase 1 | 0.08 | OrthoFinder output from all 47 species | |
| Aev_g09895 | STM, SHM1, SHMT1 | EC_2.1 transferase transferring one-carbon group &... | 0.05 | OrthoFinder output from all 47 species | |
| Ala_g06688 | STM, SHM1, SHMT1 | EC_2.1 transferase transferring one-carbon group &... | 0.04 | OrthoFinder output from all 47 species | |
| Als_g06300 | STM, SHM1, SHMT1 | EC_2.1 transferase transferring one-carbon group &... | 0.05 | OrthoFinder output from all 47 species | |
| Aob_g16059 | STM, SHM1, SHMT1 | EC_2.1 transferase transferring one-carbon group &... | 0.06 | OrthoFinder output from all 47 species | |
| Aop_g09183 | SHM7 | EC_2.1 transferase transferring one-carbon group &... | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g11376 | STM, SHM1, SHMT1 | EC_2.1 transferase transferring one-carbon group &... | 0.08 | OrthoFinder output from all 47 species | |
| Aspi01Gene56437.t1 | STM, SHM1,... | EC_2.1 transferase transferring one-carbon group &... | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0102.g044437 | STM, SHM1, SHMT1 | EC_2.1 transferase transferring one-carbon group &... | 0.08 | OrthoFinder output from all 47 species | |
| Cba_g12674 | STM, SHM1, SHMT1 | EC_2.1 transferase transferring one-carbon group &... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.28G027700.1 | STM, SHM1,... | EC_2.1 transferase transferring one-carbon group &... | 0.05 | OrthoFinder output from all 47 species | |
| Cre16.g664550 | STM, SHM1, SHMT1 | Amino acid metabolism.biosynthesis.serine... | 0.01 | OrthoFinder output from all 47 species | |
| Dcu_g14554 | STM, SHM1, SHMT1 | EC_2.1 transferase transferring one-carbon group &... | 0.09 | OrthoFinder output from all 47 species | |
| Dcu_g21464 | STM, SHM1, SHMT1 | EC_2.1 transferase transferring one-carbon group &... | 0.06 | OrthoFinder output from all 47 species | |
| Dde_g20927 | STM, SHM1, SHMT1 | EC_2.1 transferase transferring one-carbon group &... | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g16256 | STM, SHM1, SHMT1 | EC_2.1 transferase transferring one-carbon group &... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01003852001 | STM, SHM1, SHMT1 | Photosynthesis.photorespiration.serine hydroxymethyltransferase | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01003859001 | STM, SHM1, SHMT1 | Photosynthesis.photorespiration.serine hydroxymethyltransferase | 0.05 | OrthoFinder output from all 47 species | |
| Gb_16208 | AtSHMT3, SHM3 | serine hydroxymethyltransferase | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os03g52840.1 | STM, SHM1,... | serine hydroxymethyltransferase | 0.04 | OrthoFinder output from all 47 species | |
| Len_g12401 | STM, SHM1, SHMT1 | EC_2.1 transferase transferring one-carbon group &... | 0.11 | OrthoFinder output from all 47 species | |
| Lfl_g04055 | STM, SHM1, SHMT1 | EC_2.1 transferase transferring one-carbon group &... | 0.07 | OrthoFinder output from all 47 species | |
| MA_730617g0010 | AtSHMT3, SHM3 | serine hydroxymethyltransferase | 0.02 | OrthoFinder output from all 47 species | |
| MA_99276g0010 | STM, SHM1, SHMT1 | serine hydroxymethyltransferase | 0.04 | OrthoFinder output from all 47 species | |
| Mp2g08370.1 | STM, SHM1, SHMT1 | serine hydroxymethyltransferase | 0.05 | OrthoFinder output from all 47 species | |
| Msp_g48544 | STM, SHM1, SHMT1 | EC_2.1 transferase transferring one-carbon group &... | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g03063 | STM, SHM1, SHMT1 | EC_2.1 transferase transferring one-carbon group &... | 0.05 | OrthoFinder output from all 47 species | |
| Ore_g09056 | STM, SHM1, SHMT1 | EC_2.1 transferase transferring one-carbon group &... | 0.07 | OrthoFinder output from all 47 species | |
| Pir_g00993 | STM, SHM1, SHMT1 | EC_2.1 transferase transferring one-carbon group &... | 0.06 | OrthoFinder output from all 47 species | |
| Pnu_g10887 | STM, SHM1, SHMT1 | EC_2.1 transferase transferring one-carbon group &... | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g14402 | STM, SHM1, SHMT1 | EC_2.1 transferase transferring one-carbon group &... | 0.05 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0026.g009449 | AtSHMT3, SHM3 | not classified & original description: CDS=1-555 | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0207.g025814 | SHM4 | EC_2.1 transferase transferring one-carbon group &... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g36946 | No alias | EC_2.1 transferase transferring one-carbon group &... | 0.09 | OrthoFinder output from all 47 species | |
| Smo270566 | STM, SHM1, SHMT1 | Photosynthesis.photorespiration.serine hydroxymethyltransferase | 0.05 | OrthoFinder output from all 47 species | |
| Solyc02g091560.3.1 | STM, SHM1,... | serine hydroxymethyltransferase | 0.05 | OrthoFinder output from all 47 species | |
| Spa_g16771 | STM, SHM1, SHMT1 | EC_2.1 transferase transferring one-carbon group &... | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g10060 | STM, SHM1, SHMT1 | EC_2.1 transferase transferring one-carbon group &... | 0.09 | OrthoFinder output from all 47 species | |
| Zm00001e005607_P001 | STM, SHM1,... | serine hydroxymethyltransferase | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004375 | glycine dehydrogenase (decarboxylating) activity | IEP | HCCA |
| BP | GO:0006544 | glycine metabolic process | IEP | HCCA |
| BP | GO:0006546 | glycine catabolic process | IEP | HCCA |
| BP | GO:0006813 | potassium ion transport | IEP | HCCA |
| BP | GO:0009063 | amino acid catabolic process | IEP | HCCA |
| BP | GO:0009069 | serine family amino acid metabolic process | IEP | HCCA |
| BP | GO:0009071 | serine family amino acid catabolic process | IEP | HCCA |
| CC | GO:0009521 | photosystem | IEP | HCCA |
| CC | GO:0009522 | photosystem I | IEP | HCCA |
| CC | GO:0009538 | photosystem I reaction center | IEP | HCCA |
| BP | GO:0015979 | photosynthesis | IEP | HCCA |
| BP | GO:0016054 | organic acid catabolic process | IEP | HCCA |
| MF | GO:0016491 | oxidoreductase activity | IEP | HCCA |
| MF | GO:0016638 | oxidoreductase activity, acting on the CH-NH2 group of donors | IEP | HCCA |
| MF | GO:0016642 | oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor | IEP | HCCA |
| BP | GO:0030001 | metal ion transport | IEP | HCCA |
| BP | GO:0044282 | small molecule catabolic process | IEP | HCCA |
| BP | GO:0046395 | carboxylic acid catabolic process | IEP | HCCA |
| BP | GO:0110102 | ribulose bisphosphate carboxylase complex assembly | IEP | HCCA |
| BP | GO:1901565 | organonitrogen compound catabolic process | IEP | HCCA |
| BP | GO:1901605 | alpha-amino acid metabolic process | IEP | HCCA |
| BP | GO:1901606 | alpha-amino acid catabolic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR039429 | SHMT-like_dom | 53 | 450 |
| No external refs found! |