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  5. Adi_g081122

Adi_g081122 (ATRAD18, SMC6B, MIM)


Aliases : ATRAD18, SMC6B, MIM

Description : component *(SMC6) of homologous recombination repair Smc5-Smc6 complex & original description: none


Gene families : OG0004807 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004807_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g081122

Target Alias Description ECC score Gene Family Method Actions
AT5G07660 SMC6A structural maintenance of chromosomes 6A 0.03 OrthoFinder output from all 47 species
AT5G61460 ATRAD18, SMC6B, MIM P-loop containing nucleoside triphosphate hydrolases... 0.06 OrthoFinder output from all 47 species
Aev_g07319 ATRAD18, SMC6B, MIM component *(SMC6) of homologous recombination repair... 0.02 OrthoFinder output from all 47 species
Ala_g08493 ATRAD18, SMC6B, MIM component *(SMC6) of homologous recombination repair... 0.04 OrthoFinder output from all 47 species
Als_g11694 ATRAD18, SMC6B, MIM component *(SMC6) of homologous recombination repair... 0.02 OrthoFinder output from all 47 species
Aob_g11379 SMC6A component *(SMC6) of homologous recombination repair... 0.02 OrthoFinder output from all 47 species
Aspi01Gene38317.t1 ATRAD18, SMC6B,... component *(SMC6) of homologous recombination repair... 0.03 OrthoFinder output from all 47 species
Ceric.03G053800.1 ATRAD18, SMC6B,... component *(SMC6) of homologous recombination repair... 0.04 OrthoFinder output from all 47 species
Dcu_g09369 ATRAD18, SMC6B, MIM component *(SMC6) of homologous recombination repair... 0.02 OrthoFinder output from all 47 species
Gb_31282 ATRAD18, SMC6B, MIM component SMC6 of homologous recombination repair... 0.03 OrthoFinder output from all 47 species
Len_g01400 ATRAD18, SMC6B, MIM component *(SMC6) of homologous recombination repair... 0.03 OrthoFinder output from all 47 species
Lfl_g02370 ATRAD18, SMC6B, MIM component *(SMC6) of homologous recombination repair... 0.06 OrthoFinder output from all 47 species
MA_9752383g0010 SMC6A Structural maintenance of chromosomes protein 6B... 0.03 OrthoFinder output from all 47 species
Ore_g08000 ATRAD18, SMC6B, MIM component *(SMC6) of homologous recombination repair... 0.05 OrthoFinder output from all 47 species
Sam_g36733 No alias component *(SMC6) of homologous recombination repair... 0.02 OrthoFinder output from all 47 species
Solyc05g051680.4.1 ATRAD18, SMC6B,... component SMC6 of homologous recombination repair... 0.04 OrthoFinder output from all 47 species
Spa_g04441 ATRAD18, SMC6B, MIM component *(SMC6) of homologous recombination repair... 0.02 OrthoFinder output from all 47 species
Tin_g39944 ATRAD18, SMC6B, MIM component *(SMC6) of homologous recombination repair... 0.03 OrthoFinder output from all 47 species
Zm00001e033734_P001 ATRAD18, SMC6B,... component SMC6 of homologous recombination repair... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP HCCA
CC GO:0000152 nuclear ubiquitin ligase complex IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005680 anaphase-promoting complex IEP HCCA
CC GO:0005694 chromosome IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0008170 N-methyltransferase activity IEP HCCA
MF GO:0008276 protein methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016278 lysine N-methyltransferase activity IEP HCCA
MF GO:0016279 protein-lysine N-methyltransferase activity IEP HCCA
MF GO:0018024 histone lysine N-methyltransferase activity IEP HCCA
CC GO:0031461 cullin-RING ubiquitin ligase complex IEP HCCA
MF GO:0042054 histone methyltransferase activity IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR003395 RecF/RecN/SMC_N 16 1028
No external refs found!