Aliases : DCL1, CAF, EMB76, SIN1, ATDCL1, EMB60, SUS1, ASU1
Description : endoribonuclease component *(DCL1) of DCL1-HYL1 miRNA biogenesis complex & original description: none
Gene families : OG0000378 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000378_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT1G01040 | DCL1, CAF,... | dicer-like 1 | 0.03 | OrthoFinder output from all 47 species | |
AT5G20320 | DCL4, ATDCL4 | dicer-like 4 | 0.03 | OrthoFinder output from all 47 species | |
Adi_g017408 | DCL1, CAF,... | endoribonuclease component *(DCL1) of DCL1-HYL1 miRNA... | 0.03 | OrthoFinder output from all 47 species | |
Als_g22807 | DCL1, CAF,... | endoribonuclease component *(DCL1) of DCL1-HYL1 miRNA... | 0.03 | OrthoFinder output from all 47 species | |
Aob_g19967 | DCL1, CAF,... | endoribonuclease (DCL2) of transacting siRNA pathway &... | 0.02 | OrthoFinder output from all 47 species | |
Aop_g31318 | DCL4, ATDCL4 | endoribonuclease (DCL4) of transacting siRNA pathway &... | 0.04 | OrthoFinder output from all 47 species | |
Ceric.1Z277300.1 | DCL1, CAF,... | not classified & original description: pacid=50600427... | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os01g68120.1 | ATDCL3, DCL3,... | endoribonuclease (DCL3) | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os09g14610.1 | ATDCL2, DCL2,... | Endoribonuclease Dicer homolog 2b OS=Oryza sativa subsp.... | 0.01 | OrthoFinder output from all 47 species | |
Lfl_g06763 | DCL1, CAF,... | endoribonuclease component *(DCL1) of DCL1-HYL1 miRNA... | 0.02 | OrthoFinder output from all 47 species | |
MA_10436812g0020 | DCL4, ATDCL4 | Dicer-like protein 4 OS=Arabidopsis thaliana... | 0.02 | OrthoFinder output from all 47 species | |
Mp7g11720.1 | DCL4, ATDCL4 | endoribonuclease (DCL3). endoribonuclease (DCL4) | 0.02 | OrthoFinder output from all 47 species | |
Mp7g12090.1 | DCL1, CAF,... | endoribonuclease component DCL1 of DCL1-HYL1 miRNA... | 0.02 | OrthoFinder output from all 47 species | |
Ppi_g29457 | DCL4, ATDCL4 | endoribonuclease (DCL4) of transacting siRNA pathway &... | 0.02 | OrthoFinder output from all 47 species | |
Sam_g39235 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Smo444049 | DCL1, CAF,... | RNA biosynthesis.siRNA biogenesis.DCL-type endoribonuclease | 0.02 | OrthoFinder output from all 47 species | |
Smo448444 | DCL1, CAF,... | RNA biosynthesis.siRNA biogenesis.DCL-type endoribonuclease | 0.02 | OrthoFinder output from all 47 species | |
Smo74321 | DCL4, ATDCL4 | RNA biosynthesis.siRNA biogenesis.DCL-type endoribonuclease | 0.02 | OrthoFinder output from all 47 species | |
Solyc08g067210.3.1 | ATDCL3, DCL3,... | endoribonuclease (DCL3) | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e041209_P001 | DCL4, ATDCL4,... | endoribonuclease (DCL4). component DRB7 of DRB4-DRB7.1... | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | IEA | Interproscan |
MF | GO:0005524 | ATP binding | IEA | Interproscan |
MF | GO:0016787 | hydrolase activity | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005515 | protein binding | IEP | HCCA |
BP | GO:0006810 | transport | IEP | HCCA |
BP | GO:0006890 | retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum | IEP | HCCA |
MF | GO:0008107 | galactoside 2-alpha-L-fucosyltransferase activity | IEP | HCCA |
MF | GO:0008417 | fucosyltransferase activity | IEP | HCCA |
MF | GO:0009678 | pyrophosphate hydrolysis-driven proton transmembrane transporter activity | IEP | HCCA |
MF | GO:0015078 | proton transmembrane transporter activity | IEP | HCCA |
MF | GO:0015399 | primary active transmembrane transporter activity | IEP | HCCA |
MF | GO:0019829 | ATPase-coupled monoatomic cation transmembrane transporter activity | IEP | HCCA |
MF | GO:0019899 | enzyme binding | IEP | HCCA |
MF | GO:0022853 | active monoatomic ion transmembrane transporter activity | IEP | HCCA |
MF | GO:0031127 | alpha-(1,2)-fucosyltransferase activity | IEP | HCCA |
MF | GO:0031267 | small GTPase binding | IEP | HCCA |
CC | GO:0033178 | proton-transporting two-sector ATPase complex, catalytic domain | IEP | HCCA |
CC | GO:0033180 | proton-transporting V-type ATPase, V1 domain | IEP | HCCA |
BP | GO:0034220 | monoatomic ion transmembrane transport | IEP | HCCA |
BP | GO:0042546 | cell wall biogenesis | IEP | HCCA |
MF | GO:0042625 | ATPase-coupled ion transmembrane transporter activity | IEP | HCCA |
MF | GO:0042626 | ATPase-coupled transmembrane transporter activity | IEP | HCCA |
MF | GO:0043021 | ribonucleoprotein complex binding | IEP | HCCA |
MF | GO:0043022 | ribosome binding | IEP | HCCA |
BP | GO:0044085 | cellular component biogenesis | IEP | HCCA |
MF | GO:0044769 | ATPase activity, coupled to transmembrane movement of ions, rotational mechanism | IEP | HCCA |
MF | GO:0044877 | protein-containing complex binding | IEP | HCCA |
MF | GO:0046961 | proton-transporting ATPase activity, rotational mechanism | IEP | HCCA |
BP | GO:0048193 | Golgi vesicle transport | IEP | HCCA |
MF | GO:0051020 | GTPase binding | IEP | HCCA |
BP | GO:0051179 | localization | IEP | HCCA |
BP | GO:0051234 | establishment of localization | IEP | HCCA |
BP | GO:0071554 | cell wall organization or biogenesis | IEP | HCCA |
BP | GO:0098655 | monoatomic cation transmembrane transport | IEP | HCCA |
BP | GO:1902600 | proton transmembrane transport | IEP | HCCA |
No external refs found! |