Aliases : NRPD5, ATRPABC24.3, NRPB5, RPB5A
Description : component *(NRPD5) of RNA polymerase IV complex & original description: none
Gene families : OG0003853 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003853_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00068p00034280 | NRPD5,... | RNA biosynthesis.DNA-dependent RNA polymerase (Pol)... | 0.02 | OrthoFinder output from all 47 species | |
Sam_g06312 | No alias | component *(NRPE5) of RNA polymerase V complex &... | 0.03 | OrthoFinder output from all 47 species | |
Sam_g06313 | No alias | component *(NRPE5) of RNA polymerase V complex &... | 0.03 | OrthoFinder output from all 47 species | |
Sam_g21440 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Smo228648 | NRPD5,... | RNA biosynthesis.DNA-dependent RNA polymerase (Pol)... | 0.02 | OrthoFinder output from all 47 species | |
Solyc03g025570.2.1 | NRPD5,... | subunit 5 of RNA polymerase | 0.02 | OrthoFinder output from all 47 species | |
Solyc05g051790.3.1 | NRPD5,... | subunit 5 of RNA polymerase | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | IEA | Interproscan |
MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEA | Interproscan |
BP | GO:0006351 | DNA-templated transcription | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0005575 | cellular_component | IEP | HCCA |
CC | GO:0005789 | endoplasmic reticulum membrane | IEP | HCCA |
CC | GO:0008303 | caspase complex | IEP | HCCA |
BP | GO:0016255 | attachment of GPI anchor to protein | IEP | HCCA |
CC | GO:0031090 | organelle membrane | IEP | HCCA |
CC | GO:0032991 | protein-containing complex | IEP | HCCA |
CC | GO:0042765 | GPI-anchor transamidase complex | IEP | HCCA |
CC | GO:0071203 | WASH complex | IEP | HCCA |
CC | GO:0140534 | endoplasmic reticulum protein-containing complex | IEP | HCCA |
CC | GO:1905368 | peptidase complex | IEP | HCCA |
CC | GO:1905369 | endopeptidase complex | IEP | HCCA |
No external refs found! |