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  5. Adi_g080528

Adi_g080528


Description : not classified & original description: none


Gene families : OG0000185 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000185_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g080528

Target Alias Description ECC score Gene Family Method Actions
Aev_g04093 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g04404 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s2745.g112879 No alias not classified & original description: CDS=1299-2981 0.04 OrthoFinder output from all 47 species
GSVIVT01012514001 HEN4 KH domain-containing protein HEN4 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01021523001 No alias KH domain-containing protein At4g18375 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Ore_g41373 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g16383 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g35222 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc11g010840.2.1 Solyc11g010840 RNA-binding KH domain-containing protein RCF3... 0.02 OrthoFinder output from all 47 species
Solyc12g055780.3.1 Solyc12g055780 RNA-binding KH domain-containing protein RCF3... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
InterPro domains Description Start Stop
IPR004088 KH_dom_type_1 309 355
IPR004088 KH_dom_type_1 54 109
IPR004088 KH_dom_type_1 176 242
IPR004088 KH_dom_type_1 393 461
No external refs found!