GSVIVT01002442001


Description : 27.3.24 RNA.regulation of transcription.MADS box transcription factor family Encodes a MADS-box protein involved in flowering. Regulates the expression of SOC1 and is also upregulated by SOC1. Binds with IMK3 kinase domain. Phosphorylated by IMK3 likely to be a target for IMK3 kinase domain. AGAMOUS-like 24 (AGL24)


Gene families : OG_01_0000006 (Gene family) Phylogenetic Tree(s): OG0000006_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): GSVIVT01002442001
Cluster HCCA cluster: Cluster_227

Target Alias Description ECC score Gene Family Method Actions
AT5G60910 AGL8, FUL AGAMOUS-like 8 0.03 Gene family
GSVIVT01008139001 No alias 33.99 development.unspecified Encodes a MADS box... 0.03 Gene family
GSVIVT01010221001 No alias 27.3.24 RNA.regulation of transcription.MADS box... 0.03 Gene family
GSVIVT01012110001 No alias 27.3.24 RNA.regulation of transcription.MADS box... 0.02 Gene family
GSVIVT01025945001 No alias 27.3.24 RNA.regulation of transcription.MADS box... 0.02 Gene family
GSVIVT01026207001 No alias 27.3.24 RNA.regulation of transcription.MADS box... 0.02 Gene family
LOC_Os01g66290 Os01g0886200 33.99 development.unspecified AGAMOUS [AG]-like MADS box... 0.03 Gene family
LOC_Os02g07430 Os02g0170300 27.3.24 RNA.regulation of transcription.MADS box... 0.04 Gene family
LOC_Os03g08754 Os03g0186600 33.99 development.unspecified Encodes a nuclear protein... 0.06 Gene family
LOC_Os06g30810 Os06g0504100 No description available 0.06 Gene family
LOC_Os08g41960 Os08g0531900 27.3.24 RNA.regulation of transcription.MADS box... 0.04 Gene family
LOC_Os09g02780 Os09g0116000 No description available 0.04 Gene family
MA_211156g0010 No alias 33.99 development.unspecified Floral homeotic gene... 0.05 Gene family
MA_25342g0010 No alias 27.3.24 RNA.regulation of transcription.MADS box... 0.02 Gene family
MA_254338g0010 No alias No description available 0.02 Gene family
MA_458668g0010 No alias No description available 0.04 Gene family
MA_6805g0010 No alias 27.3.24 RNA.regulation of transcription.MADS box... 0.02 Gene family
Solyc02g089200.3.1 Solyc02g089200.3 27.3.24 RNA.regulation of transcription.MADS box... 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan
MF GO:0046983 protein dimerization activity IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002100 TF_MADSbox 34 81
No external refs found!