AMTR_s00171p00033150 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00171.12

Description : Cell cycle.cytokinesis.phragmoplast disassembly.Katanin ATP-dependent microtubule severing complex.regulatory component


Gene families : OG_01_0002119 (Archaeplastida) Phylogenetic Tree(s): OG_01_0002119_tree ,
OG_02_0002343 (LandPlants) Phylogenetic Tree(s): OG_02_0002343_tree ,
OG_03_0004229 (SeedPlants) Phylogenetic Tree(s): OG_03_0004229_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00171p00033150
Cluster HCCA: Cluster_98

Target Alias Description ECC score Gene Family Method Actions
LOC_Os01g57210.1 No alias regulatory component of Katanin ATP-dependent... 0.03 Archaeplastida
Zm00001e004487_P002 No alias regulatory component of Katanin ATP-dependent... 0.03 Archaeplastida
Zm00001e041938_P001 No alias regulatory component of Katanin ATP-dependent... 0.03 Archaeplastida
GSVIVT01034331001 No alias Cell cycle.cytokinesis.phragmoplast disassembly.Katanin... 0.02 LandPlants
Zm00001e004487_P002 No alias regulatory component of Katanin ATP-dependent... 0.03 LandPlants
Zm00001e041938_P001 No alias regulatory component of Katanin ATP-dependent... 0.03 LandPlants
GSVIVT01034331001 No alias Cell cycle.cytokinesis.phragmoplast disassembly.Katanin... 0.02 SeedPlants
Zm00001e041938_P001 No alias regulatory component of Katanin ATP-dependent... 0.03 SeedPlants

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001680 WD40_repeat 185 223
IPR001680 WD40_repeat 102 139
IPR001680 WD40_repeat 21 54
IPR001680 WD40_repeat 145 181
IPR001680 WD40_repeat 63 97
No external refs found!