Adi_g079702


Description : component *(Symplekin/Pta1) of Cleavage and Polyadenylation Specificity Factor (CPSF) complex & original description: none


Gene families : OG0002204 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002204_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g079702

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00088050 ESP4,... RNA processing.RNA 3-end polyadenylation.Cleavage and... 0.03 OrthoFinder output from all 47 species
Cba_g36378 No alias component *(Symplekin/Pta1) of Cleavage and... 0.03 OrthoFinder output from all 47 species
Ceric.01G050700.1 Ceric.01G050700 component *(Symplekin/Pta1) of Cleavage and... 0.03 OrthoFinder output from all 47 species
Ceric.12G019100.1 ESP4, Ceric.12G019100 component *(Symplekin/Pta1) of Cleavage and... 0.02 OrthoFinder output from all 47 species
Dac_g06615 No alias component *(Symplekin/Pta1) of Cleavage and... 0.02 OrthoFinder output from all 47 species
Dde_g04949 ESP4 component *(Symplekin/Pta1) of Cleavage and... 0.02 OrthoFinder output from all 47 species
Dde_g21527 No alias component *(Symplekin/Pta1) of Cleavage and... 0.02 OrthoFinder output from all 47 species
GSVIVT01009244001 No alias RNA processing.RNA 3-end polyadenylation.Cleavage and... 0.02 OrthoFinder output from all 47 species
GSVIVT01011157001 ESP4 RNA processing.RNA 3-end polyadenylation.Cleavage and... 0.02 OrthoFinder output from all 47 species
LOC_Os01g49940.1 LOC_Os01g49940 component Symplekin/Pta1 of Cleavage and Polyadenylation... 0.02 OrthoFinder output from all 47 species
Lfl_g06265 No alias component *(Symplekin/Pta1) of Cleavage and... 0.04 OrthoFinder output from all 47 species
MA_10432378g0010 No alias component Symplekin/Pta1 of Cleavage and Polyadenylation... 0.02 OrthoFinder output from all 47 species
Mp6g03410.1 No alias component Symplekin/Pta1 of Cleavage and Polyadenylation... 0.02 OrthoFinder output from all 47 species
Ore_g27266 No alias component *(Symplekin/Pta1) of Cleavage and... 0.02 OrthoFinder output from all 47 species
Pir_g03429 ESP4 component *(Symplekin/Pta1) of Cleavage and... 0.03 OrthoFinder output from all 47 species
Sam_g08972 No alias component *(Symplekin/Pta1) of Cleavage and... 0.06 OrthoFinder output from all 47 species
Sam_g17991 No alias component *(Symplekin/Pta1) of Cleavage and... 0.04 OrthoFinder output from all 47 species
Smo442688 ESP4 RNA processing.RNA 3-end polyadenylation.Cleavage and... 0.02 OrthoFinder output from all 47 species
Solyc04g076910.3.1 Solyc04g076910 component Symplekin/Pta1 of Cleavage and Polyadenylation... 0.02 OrthoFinder output from all 47 species
Solyc09g005330.3.1 ESP4, Solyc09g005330 component Symplekin/Pta1 of Cleavage and Polyadenylation... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
InterPro domains Description Start Stop
IPR032460 Symplekin/Pta1_N 105 320
IPR022075 Symplekin_C 1151 1192
No external refs found!