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Aliases : SHI
Description : SRS-type transcription factor & original description: none
Gene families : OG0001235 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001235_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Ehy_g15703 | |
| Cluster | HCCA: Cluster_88 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G19790 | SRS7 | SHI-related sequence 7 | 0.03 | OrthoFinder output from all 47 species | |
| AT3G51060 | SRS1, STY1 | Lateral root primordium (LRP) protein-related | 0.03 | OrthoFinder output from all 47 species | |
| AT3G54430 | SRS6 | SHI-related sequence 6 | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g23682 | SRS1, STY1 | SRS-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g20579 | SRS1, STY1 | SRS-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.32G058400.1 | SRS1, STY1,... | SRS-type transcription factor & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g40676 | SHI | SRS-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01009812001 | SRS5 | RNA biosynthesis.transcriptional activation.SRS... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os06g49830.1 | SRS1, STY1,... | transcription factor (SRS) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os08g43410.1 | SRS1, STY1,... | transcription factor (SRS) | 0.02 | OrthoFinder output from all 47 species | |
| Mp3g19510.1 | SHI | transcription factor (SRS) | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g26494 | SHI | SRS-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g22589 | SHI | SRS-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Solyc10g054070.1.1 | SRS5, Solyc10g054070 | transcription factor (SRS) | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g50442 | SHI | SRS-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e010227_P001 | SRS1, STY1,... | transcription factor (SRS) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e013256_P002 | SHI, Zm00001e013256 | transcription factor (SRS) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e026854_P001 | SHI, Zm00001e026854 | transcription factor (SRS) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e034798_P001 | SRS1, STY1,... | transcription factor (SRS) | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003678 | DNA helicase activity | IEP | HCCA |
| MF | GO:0003824 | catalytic activity | IEP | HCCA |
| MF | GO:0003950 | NAD+ ADP-ribosyltransferase activity | IEP | HCCA |
| MF | GO:0003968 | RNA-dependent RNA polymerase activity | IEP | HCCA |
| MF | GO:0004386 | helicase activity | IEP | HCCA |
| MF | GO:0005507 | copper ion binding | IEP | HCCA |
| BP | GO:0006281 | DNA repair | IEP | HCCA |
| BP | GO:0006302 | double-strand break repair | IEP | HCCA |
| BP | GO:0006303 | double-strand break repair via nonhomologous end joining | IEP | HCCA |
| BP | GO:0006511 | ubiquitin-dependent protein catabolic process | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | HCCA |
| MF | GO:0008094 | ATP-dependent activity, acting on DNA | IEP | HCCA |
| MF | GO:0008131 | primary amine oxidase activity | IEP | HCCA |
| BP | GO:0009308 | amine metabolic process | IEP | HCCA |
| BP | GO:0016567 | protein ubiquitination | IEP | HCCA |
| MF | GO:0016627 | oxidoreductase activity, acting on the CH-CH group of donors | IEP | HCCA |
| MF | GO:0016638 | oxidoreductase activity, acting on the CH-NH2 group of donors | IEP | HCCA |
| MF | GO:0016641 | oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor | IEP | HCCA |
| MF | GO:0016740 | transferase activity | IEP | HCCA |
| MF | GO:0016763 | pentosyltransferase activity | IEP | HCCA |
| MF | GO:0019899 | enzyme binding | IEP | HCCA |
| BP | GO:0019941 | modification-dependent protein catabolic process | IEP | HCCA |
| MF | GO:0031625 | ubiquitin protein ligase binding | IEP | HCCA |
| BP | GO:0032446 | protein modification by small protein conjugation | IEP | HCCA |
| BP | GO:0033554 | cellular response to stress | IEP | HCCA |
| MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | HCCA |
| BP | GO:0043632 | modification-dependent macromolecule catabolic process | IEP | HCCA |
| BP | GO:0044265 | cellular macromolecule catabolic process | IEP | HCCA |
| MF | GO:0044389 | ubiquitin-like protein ligase binding | IEP | HCCA |
| MF | GO:0048038 | quinone binding | IEP | HCCA |
| BP | GO:0051603 | proteolysis involved in protein catabolic process | IEP | HCCA |
| BP | GO:0051716 | cellular response to stimulus | IEP | HCCA |
| MF | GO:0097747 | RNA polymerase activity | IEP | HCCA |
| MF | GO:0140097 | catalytic activity, acting on DNA | IEP | HCCA |
| MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |