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  5. Adi_g079622

Adi_g079622 (TMN1, AtTMN1)


Aliases : TMN1, AtTMN1

Description : not classified & original description: none


Gene families : OG0000505 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000505_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g079622

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00024p00115620 evm_27.TU.AmTr_v1... Transmembrane 9 superfamily member 2 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00070p00145350 TMN1, AtTMN1,... Transmembrane 9 superfamily member 1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT1G10950 TMN1, AtTMN1 transmembrane nine 1 0.02 OrthoFinder output from all 47 species
Adi_g041686 TMN1, AtTMN1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g32517 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g27302 TMN1, AtTMN1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g71218 TMN1, AtTMN1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.01G022200.1 Ceric.01G022200 not classified & original description: pacid=50590564... 0.04 OrthoFinder output from all 47 species
Ceric.22G054000.1 Ceric.22G054000 not classified & original description: pacid=50613875... 0.05 OrthoFinder output from all 47 species
Ceric.34G054800.1 TMN1, AtTMN1,... not classified & original description: pacid=50624162... 0.02 OrthoFinder output from all 47 species
Cre01.g024350 No alias Transmembrane 9 superfamily member 2 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Cre14.g611850 TMN1, AtTMN1 Transmembrane 9 superfamily member 1 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Dac_g03775 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01011574001 No alias Transmembrane 9 superfamily member 2 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Gb_07212 TMN1, AtTMN1 Transmembrane 9 superfamily member 1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os11g07910.1 TMN1, AtTMN1,... Transmembrane 9 superfamily member 1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Len_g05429 TMN1, AtTMN1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g05549 TMN1, AtTMN1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g38915 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10431134g0010 TMN1, AtTMN1 Transmembrane 9 superfamily member 1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Mp3g07580.1 No alias Transmembrane 9 superfamily member 2 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Nbi_g06736 TMN1, AtTMN1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g19351 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g45907 TMN1, AtTMN1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0112.g020786 TMN1, AtTMN1 not classified & original description: CDS=134-1804 0.03 OrthoFinder output from all 47 species
Sam_g13480 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo163520 TMN1, AtTMN1 Transmembrane 9 superfamily member 1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Smo170330 No alias Transmembrane 9 superfamily member 2 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Solyc04g014570.3.1 Solyc04g014570 Transmembrane 9 superfamily member 3 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Solyc05g054040.4.1 Solyc05g054040 Transmembrane 9 superfamily member 3 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Solyc11g022540.3.1 TMN1, AtTMN1,... Transmembrane 9 superfamily member 1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e014799_P002 TMN1, AtTMN1,... Transmembrane 9 superfamily member 1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e040192_P001 Zm00001e040192 Transmembrane 9 superfamily member 3 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR004240 EMP70 52 360
No external refs found!