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  5. Adi_g079333

Adi_g079333


Description : component *(uL24) of large ribosomal-subunit (LSU) proteome & original description: none


Gene families : OG0000884 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000884_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g079333
Cluster HCCA: Cluster_367

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00214810 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 OrthoFinder output from all 47 species
AT3G49910 No alias Translation protein SH3-like family protein 0.03 OrthoFinder output from all 47 species
Ala_g15510 No alias component *(uL24) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Ala_g33821 No alias component *(uL24) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Aob_g02606 No alias component *(uL24) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000144.60 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 OrthoFinder output from all 47 species
Cre01.g040000 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.04 OrthoFinder output from all 47 species
Dac_g26116 No alias component *(uL24) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
GSVIVT01000114001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 OrthoFinder output from all 47 species
Gb_05675 No alias component RPL26 of LSU proteome component 0.04 OrthoFinder output from all 47 species
Gb_06102 No alias component RPL26 of LSU proteome component 0.05 OrthoFinder output from all 47 species
LOC_Os11g05370.1 LOC_Os11g05370 component RPL26 of LSU proteome component 0.03 OrthoFinder output from all 47 species
LOC_Os12g05430.1 LOC_Os12g05430 component RPL26 of LSU proteome component 0.04 OrthoFinder output from all 47 species
Len_g25530 No alias component *(uL24) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Lfl_g06903 No alias component *(uL24) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
MA_13141g0010 No alias component RPL26 of LSU proteome component 0.04 OrthoFinder output from all 47 species
MA_158811g0010 No alias component RPL26 of LSU proteome component 0.03 OrthoFinder output from all 47 species
Mp2g12870.1 No alias component RPL26 of LSU proteome component 0.02 OrthoFinder output from all 47 species
Ore_g08095 No alias component *(uL24) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Pir_g13997 No alias component *(uL24) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Pp3c14_25170V3.1 Pp3c14_25170 Translation protein SH3-like family protein 0.03 OrthoFinder output from all 47 species
Pp3c1_25000V3.1 Pp3c1_25000 Translation protein SH3-like family protein 0.02 OrthoFinder output from all 47 species
Pp3c2_15910V3.1 Pp3c2_15910 Translation protein SH3-like family protein 0.03 OrthoFinder output from all 47 species
Sam_g05724 No alias component *(uL24) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Sam_g12169 No alias component *(uL24) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Smo227399 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.04 OrthoFinder output from all 47 species
Solyc02g064670.1.1 Solyc02g064670 component RPL26 of LSU proteome component 0.02 OrthoFinder output from all 47 species
Solyc03g044000.1.1 Solyc03g044000 component RPL26 of LSU proteome component 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
CC GO:0015934 large ribosomal subunit IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
MF GO:0005544 calcium-dependent phospholipid binding IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
CC GO:0005672 transcription factor TFIIA complex IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006367 transcription initiation at RNA polymerase II promoter IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0043169 cation binding IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
CC GO:0090575 RNA polymerase II transcription regulator complex IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR005824 KOW 92 123
IPR005756 Ribosomal_L26/L24P_euk/arc 49 162
No external refs found!