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  5. MA_109221g0020

MA_109221g0020


Description : Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidopsis thaliana (sp|q3e6q1|ppr32_arath : 474.0)


Gene families : OG_01_0016307 (Archaeplastida) Phylogenetic Tree(s): OG_01_0016307_tree ,
OG_02_0015855 (LandPlants) Phylogenetic Tree(s): OG_02_0015855_tree ,
OG_03_0015620 (SeedPlants) Phylogenetic Tree(s): OG_03_0015620_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_109221g0020
Cluster HCCA: Cluster_176

Target Alias Description ECC score Gene Family Method Actions
Gb_03548 No alias Pentatricopeptide repeat-containing protein At3g12770... 0.03 Archaeplastida
Gb_03550 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.03 Archaeplastida
Gb_03547 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.02 LandPlants
Gb_03550 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.02 LandPlants
Gb_03547 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.04 SeedPlants
Gb_03548 No alias Pentatricopeptide repeat-containing protein At3g12770... 0.02 SeedPlants
Gb_03550 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.03 SeedPlants
Gb_03551 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.02 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 476 499
IPR002885 Pentatricopeptide_repeat 606 635
IPR002885 Pentatricopeptide_repeat 205 228
IPR002885 Pentatricopeptide_repeat 578 598
IPR002885 Pentatricopeptide_repeat 401 447
IPR002885 Pentatricopeptide_repeat 301 346
IPR002885 Pentatricopeptide_repeat 502 541
IPR002885 Pentatricopeptide_repeat 704 751
No external refs found!