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  5. Adi_g078789

Adi_g078789


Description : RNA helicase *(Prp22) & original description: none


Gene families : OG0000184 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000184_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g078789

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00154740 evm_27.TU.AmTr_v1... RNA processing.RNA splicing.spliceosome... 0.02 OrthoFinder output from all 47 species
AT2G35340 MEE29 helicase domain-containing protein 0.03 OrthoFinder output from all 47 species
Ala_g08262 No alias RNA helicase Prp43 of Intron-Lariat Spliceosome complex... 0.02 OrthoFinder output from all 47 species
Als_g01190 EMB3011 RNA helicase *(Prp16) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g11071 No alias RNA helicase Prp43 of Intron-Lariat Spliceosome complex... 0.04 OrthoFinder output from all 47 species
Aop_g35974 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene28720.t1 Aspi01Gene28720 RNA helicase *(Prp22) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene64069.t1 EMB3011, Aspi01Gene64069 RNA helicase *(Prp16) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g04735 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cre11.g467654 No alias Probable pre-mRNA-splicing factor ATP-dependent RNA... 0.01 OrthoFinder output from all 47 species
Cre12.g520150 No alias Probable pre-mRNA-splicing factor ATP-dependent RNA... 0.02 OrthoFinder output from all 47 species
Cre24.g755347 EMB3011 RNA processing.RNA splicing.spliceosome... 0.02 OrthoFinder output from all 47 species
LOC_Os06g23530.1 LOC_Os06g23530 Probable pre-mRNA-splicing factor ATP-dependent RNA... 0.03 OrthoFinder output from all 47 species
LOC_Os11g20554.1 LOC_Os11g20554 Probable pre-mRNA-splicing factor ATP-dependent RNA... 0.02 OrthoFinder output from all 47 species
Nbi_g07572 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g30533 No alias RNA helicase *(Prp22) & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g09947 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0104.g020058 No alias not classified & original description: CDS=124-963 0.03 OrthoFinder output from all 47 species
Sam_g29503 No alias RNA helicase *(Prp22) & original description: none 0.03 OrthoFinder output from all 47 species
Smo76120 No alias Probable pre-mRNA-splicing factor ATP-dependent RNA... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004386 helicase activity IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP HCCA
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
CC GO:0005886 plasma membrane IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP HCCA
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016409 palmitoyltransferase activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
BP GO:0030258 lipid modification IEP HCCA
BP GO:0030259 lipid glycosylation IEP HCCA
MF GO:0031267 small GTPase binding IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043021 ribonucleoprotein complex binding IEP HCCA
MF GO:0043022 ribosome binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0044877 protein-containing complex binding IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
MF GO:0051020 GTPase binding IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR001650 Helicase_C 267 396
IPR007502 Helicase-assoc_dom 458 547
IPR011709 DEAD-box_helicase_OB_fold 610 687
No external refs found!