Aliases : AtRABA1f, RABA1f
Description : A-class RAB GTPase & original description: none
Gene families : OG0000247 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000247_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Adi_g078037 | |
Cluster | HCCA: Cluster_367 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00021p00189630 | AtRABA1f,... | Vesicle trafficking.regulation of membrane tethering and... | 0.04 | OrthoFinder output from all 47 species | |
AT1G05810 | ARA-1, ATRABA5E,... | RAB GTPase homolog A5E | 0.02 | OrthoFinder output from all 47 species | |
AT2G31680 | AtRABA5d, RABA5d | RAB GTPase homolog A5D | 0.02 | OrthoFinder output from all 47 species | |
Cre03.g189250 | ATRABA2A,... | Vesicle trafficking.regulation of membrane tethering and... | 0.01 | OrthoFinder output from all 47 species | |
Dac_g19694 | AtRABA1f, RABA1f | A-class RAB GTPase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os03g60870.1 | RABA2b,... | A-class RAB GTPase | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os05g01480.1 | ATRABA2A,... | A-class RAB GTPase | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os06g35814.1 | ATHSGBP, RABA1d,... | A-class RAB GTPase | 0.04 | OrthoFinder output from all 47 species | |
Len_g03672 | AtRABA1f, RABA1f | A-class RAB GTPase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
MA_10430522g0010 | ATRABA2A,... | A-class RAB GTPase | 0.04 | OrthoFinder output from all 47 species | |
MA_113056g0010 | AtRABA5a, RABA5a | A-class RAB GTPase | 0.03 | OrthoFinder output from all 47 species | |
Pir_g02461 | AtRABA1f, RABA1f | A-class RAB GTPase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0128.g021862 | AtRABA1f, RABA1f | A-class RAB GTPase & original description: CDS=191-841 | 0.03 | OrthoFinder output from all 47 species | |
Smo146310 | AtRABA1f, RABA1f | Vesicle trafficking.regulation of membrane tethering and... | 0.02 | OrthoFinder output from all 47 species | |
Solyc03g118820.4.1 | RABA6a,... | A-class RAB GTPase | 0.02 | OrthoFinder output from all 47 species | |
Spa_g14805 | AtRABA5d, RABA5d | A-class RAB GTPase & original description: none | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003924 | GTPase activity | IEA | Interproscan |
MF | GO:0005525 | GTP binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0005575 | cellular_component | IEP | HCCA |
CC | GO:0005750 | mitochondrial respiratory chain complex III | IEP | HCCA |
CC | GO:0005839 | proteasome core complex | IEP | HCCA |
BP | GO:0006091 | generation of precursor metabolites and energy | IEP | HCCA |
BP | GO:0006122 | mitochondrial electron transport, ubiquinol to cytochrome c | IEP | HCCA |
BP | GO:0006508 | proteolysis | IEP | HCCA |
BP | GO:0009060 | aerobic respiration | IEP | HCCA |
BP | GO:0015980 | energy derivation by oxidation of organic compounds | IEP | HCCA |
BP | GO:0016485 | protein processing | IEP | HCCA |
BP | GO:0019646 | aerobic electron transport chain | IEP | HCCA |
BP | GO:0022900 | electron transport chain | IEP | HCCA |
BP | GO:0022904 | respiratory electron transport chain | IEP | HCCA |
CC | GO:0032991 | protein-containing complex | IEP | HCCA |
BP | GO:0043085 | positive regulation of catalytic activity | IEP | HCCA |
BP | GO:0044093 | positive regulation of molecular function | IEP | HCCA |
CC | GO:0045275 | respiratory chain complex III | IEP | HCCA |
BP | GO:0045333 | cellular respiration | IEP | HCCA |
BP | GO:0050790 | regulation of catalytic activity | IEP | HCCA |
BP | GO:0051603 | proteolysis involved in protein catabolic process | IEP | HCCA |
BP | GO:0051604 | protein maturation | IEP | HCCA |
BP | GO:0065009 | regulation of molecular function | IEP | HCCA |
CC | GO:0070069 | cytochrome complex | IEP | HCCA |
CC | GO:0098798 | mitochondrial protein-containing complex | IEP | HCCA |
CC | GO:0098800 | inner mitochondrial membrane protein complex | IEP | HCCA |
CC | GO:0098803 | respiratory chain complex | IEP | HCCA |
CC | GO:0140535 | intracellular protein-containing complex | IEP | HCCA |
CC | GO:1902494 | catalytic complex | IEP | HCCA |
CC | GO:1902495 | transmembrane transporter complex | IEP | HCCA |
CC | GO:1990204 | oxidoreductase complex | IEP | HCCA |
CC | GO:1990351 | transporter complex | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001806 | Small_GTPase | 14 | 174 |
No external refs found! |