Adi_g077470 (ATRABA5C, ARA4,...)

Aliases : ATRABA5C, ARA4, ARA-4, RABA5C, ATRAB11F

Description : A-class RAB GTPase & original description: none

Gene families : OG0000247 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000247_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Adi_g077470

Target	Alias	Description	ECC score	Gene Family Method
Aob_g02896	AtRABA1f, RABA1f	A-class RAB GTPase & original description: none	0.02	OrthoFinder output from all 47 species
Azfi_s0158.g053866	ATRABA2A,...	A-class RAB GTPase & original description: CDS=282-950	0.03	OrthoFinder output from all 47 species
Ceric.16G022800.1	AtRABA1f,...	A-class RAB GTPase & original description:...	0.03	OrthoFinder output from all 47 species
Len_g04617	AtRABA1f, RABA1f	A-class RAB GTPase & original description: none	0.03	OrthoFinder output from all 47 species
Solyc01g103380.4.1	ATRABA2A,...	A-class RAB GTPase	0.02	OrthoFinder output from all 47 species
Solyc09g098170.4.1	AtRABA5d,...	A-class RAB GTPase	0.03	OrthoFinder output from all 47 species
Solyc10g045550.2.1	ATRABA2A,...	A-class RAB GTPase	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003924	GTPase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004555	alpha,alpha-trehalase activity	IEP	HCCA
BP	GO:0005984	disaccharide metabolic process	IEP	HCCA
BP	GO:0005991	trehalose metabolic process	IEP	HCCA
BP	GO:0006812	monoatomic cation transport	IEP	HCCA
BP	GO:0009311	oligosaccharide metabolic process	IEP	HCCA
MF	GO:0015927	trehalase activity	IEP	HCCA
MF	GO:0016151	nickel cation binding	IEP	HCCA
BP	GO:0030001	metal ion transport	IEP	HCCA
BP	GO:0044262	cellular carbohydrate metabolic process	IEP	HCCA
MF	GO:0046873	metal ion transmembrane transporter activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001806	Small_GTPase	26	185

External Links

No external refs found!