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Aliases : PUB26
Description : not classified & original description: none
Gene families : OG0000127 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000127_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT3G02840 | No alias | ARM repeat superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT3G18710 | PUB29, ATPUB29 | plant U-box 29 | 0.03 | OrthoFinder output from all 47 species | |
| AT3G19380 | PUB25 | plant U-box 25 | 0.04 | OrthoFinder output from all 47 species | |
| AT3G52450 | PUB22 | plant U-box 22 | 0.02 | OrthoFinder output from all 47 species | |
| AT5G65920 | No alias | ARM repeat superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g014414 | PUB25 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g077173 | PUB25 | U-Box-group-III E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g38062 | PUB25 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g02187 | PUB8, B80 | E3 ubiquitin ligase *(PUB8) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g05204 | PUB26 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g06990 | PUB23 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g20026 | PUB26 | U-Box-group-III E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g10929 | PUB26 | U-Box-group-III E3 ubiquitin ligase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g37093 | PUB26 | U-Box-group-III E3 ubiquitin ligase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g12417 | PUB26 | U-Box-group-III E3 ubiquitin ligase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g20185 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g34288 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene15171.t1 | PUB29, ATPUB29,... | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene18452.t1 | PUB25, Aspi01Gene18452 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene18453.t1 | PUB25, Aspi01Gene18453 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene19342.t1 | PUB26, Aspi01Gene19342 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene43214.t1 | PUB24, Aspi01Gene43214 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene44311.t1 | PUB22, Aspi01Gene44311 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g27489 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.08G042000.1 | Ceric.08G042000 | E3 ubiquitin ligase & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.10G007700.1 | PUB23, Ceric.10G007700 | not classified & original description: pacid=50612519... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.19G059800.1 | PUB26, Ceric.19G059800 | not classified & original description: pacid=50575490... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.24G024900.1 | PUB8, B80,... | E3 ubiquitin ligase *(PUB8) & original description:... | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g01209 | PUB23 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g01521 | PUB8, B80 | E3 ubiquitin ligase *(PUB8) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g07421 | PUB23 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g11691 | PUB26 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g03660 | PUB23 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g11880 | CMPG1, ATCMPG1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01026764001 | PUB22 | E3 ubiquitin-protein ligase PUB22 OS=Arabidopsis thaliana | 0.01 | OrthoFinder output from all 47 species | |
| GSVIVT01031720001 | PUB26 | U-box domain-containing protein 26 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
| Gb_02628 | No alias | U-box domain-containing protein 21 OS=Arabidopsis... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_02629 | No alias | U-box domain-containing protein 26 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_02635 | No alias | U-box domain-containing protein 21 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_16227 | No alias | U-box domain-containing protein 21 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os02g33680.1 | CMPG2, ATCMPG2,... | U-box domain-containing protein 29 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os04g34030.1 | PUB23, LOC_Os04g34030 | E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| MA_10425865g0010 | PUB25 | U-box domain-containing protein 25 OS=Arabidopsis... | 0.01 | OrthoFinder output from all 47 species | |
| MA_17715g0010 | CMPG1, ATCMPG1 | U-box domain-containing protein 20 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| MA_481299g0010 | PUB23 | E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| MA_684442g0010 | PUB23 | E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| Mp7g11020.1 | PUB25 | E3 ubiquitin ligase (PUB) | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g11599 | PUB23 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g47390 | PUB25 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g06628 | PUB25 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g29206 | PUB25 | E3 ubiquitin ligase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g34239 | No alias | E3 ubiquitin ligase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g19356 | PUB26 | U-Box-group-III E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g18199 | PUB23 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Smo416356 | PUB26 | U-box domain-containing protein 30 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
| Smo426053 | PUB26 | U-box domain-containing protein 26 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
| Solyc01g007000.4.1 | PUB22, Solyc01g007000 | E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc01g007010.2.1 | PUB22, Solyc01g007010 | E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc01g007020.4.1 | PUB23, Solyc01g007020 | E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc01g007030.3.1 | PUB22, Solyc01g007030 | E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc06g074140.1.1 | PUB24, Solyc06g074140 | E3 ubiquitin-protein ligase PUB24 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc11g068940.1.1 | PUB24, Solyc11g068940 | E3 ubiquitin-protein ligase PUB24 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g03410 | PUB26 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e036030_P001 | Zm00001e036030 | U-box domain-containing protein 21 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003677 | DNA binding | IEP | HCCA |
| BP | GO:0006355 | regulation of DNA-templated transcription | IEP | HCCA |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | HCCA |
| BP | GO:0010468 | regulation of gene expression | IEP | HCCA |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | HCCA |
| MF | GO:0016740 | transferase activity | IEP | HCCA |
| MF | GO:0016757 | glycosyltransferase activity | IEP | HCCA |
| MF | GO:0016758 | hexosyltransferase activity | IEP | HCCA |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
| BP | GO:0030258 | lipid modification | IEP | HCCA |
| BP | GO:0030259 | lipid glycosylation | IEP | HCCA |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | HCCA |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | HCCA |
| BP | GO:0044255 | cellular lipid metabolic process | IEP | HCCA |
| BP | GO:0050789 | regulation of biological process | IEP | HCCA |
| BP | GO:0050794 | regulation of cellular process | IEP | HCCA |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | HCCA |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
| BP | GO:0065007 | biological regulation | IEP | HCCA |
| BP | GO:0070085 | glycosylation | IEP | HCCA |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | HCCA |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | HCCA |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |