GSVIVT01001286001


Description : 27.3.32 RNA.regulation of transcription.WRKY domain transcription factor family member of WRKY Transcription Factor Group II-d WRKY DNA-binding protein 39 (WRKY39)


Gene families : OG_01_0000005 (Gene family) Phylogenetic Tree(s): OG0000005_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): GSVIVT01001286001

Target Alias Description ECC score Gene Family Method Actions
AT1G29280 ATWRKY65, WRKY65 WRKY DNA-binding protein 65 0.01 Gene family
AT2G30250 ATWRKY25, WRKY25 WRKY DNA-binding protein 25 0.02 Gene family
AT2G34830 MEE24, AtWRKY35, WRKY35 WRKY DNA-binding protein 35 0.02 Gene family
AT2G40740 WRKY55, ATWRKY55 WRKY DNA-binding protein 55 0.02 Gene family
AT5G07100 WRKY26 WRKY DNA-binding protein 26 0.01 Gene family
GSVIVT01015952001 No alias 27.3.32 RNA.regulation of transcription.WRKY domain... 0.01 Gene family
GSVIVT01019511001 No alias 27.3.32 RNA.regulation of transcription.WRKY domain... 0.01 Gene family
GSVIVT01026965001 No alias 27.3.32 RNA.regulation of transcription.WRKY domain... 0.01 Gene family
GSVIVT01027069001 No alias 27.3.32 RNA.regulation of transcription.WRKY domain... 0.01 Gene family
GSVIVT01032661001 No alias 27.3.32 RNA.regulation of transcription.WRKY domain... 0.04 Gene family
GSVIVT01035884001 No alias 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
LOC_Os01g40260 Os01g0584900 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
LOC_Os01g60520 Os01g0820700 27.3.32 RNA.regulation of transcription.WRKY domain... 0.01 Gene family
LOC_Os05g25770 Os05g0322900 27.3.32 RNA.regulation of transcription.WRKY domain... 0.03 Gene family
LOC_Os09g25060 Os09g0417600 27.3.32 RNA.regulation of transcription.WRKY domain... 0.01 Gene family
MA_136551g0010 No alias 27.3.32 RNA.regulation of transcription.WRKY domain... 0.01 Gene family
MA_88437g0010 No alias No description available 0.02 Gene family
MA_892467g0010 No alias 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
Smo92733 PACid_15420668 27.3.32 RNA.regulation of transcription.WRKY domain... 0.01 Gene family
Solyc02g094270.2.1 Solyc02g094270.2 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
Solyc08g081630.2.1 Solyc08g081630.2 27.3.32 RNA.regulation of transcription.WRKY domain... 0.01 Gene family
Solyc12g042590.2.1 Solyc12g042590.2 27.3.32 RNA.regulation of transcription.WRKY domain... 0.03 Gene family
Zm00001d002452 GRMZM2G024898 27.3.32 RNA.regulation of transcription.WRKY domain... 0.03 Gene family
Zm00001d011133 GRMZM2G137802 27.3.32 RNA.regulation of transcription.WRKY domain... 0.05 Gene family
Zm00001d018203 GRMZM5G894568 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
Zm00001d032265 GRMZM2G324999 27.3.32 RNA.regulation of transcription.WRKY domain... 0.01 Gene family
Zm00001d040554 GRMZM2G327349 27.3.32 RNA.regulation of transcription.WRKY domain... 0.01 Gene family
Zm00001d043569 GRMZM2G040298 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
Zm00001d047523 No alias 27.3.32 RNA.regulation of transcription.WRKY domain... 0.01 Gene family

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan
MF GO:0043565 sequence-specific DNA binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003657 WRKY_dom 26 46
IPR018872 Zn-cluster-dom 3 22
No external refs found!