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  5. Ehy_g15142

Ehy_g15142


Description : not classified & original description: none


Gene families : OG0001265 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001265_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ehy_g15142

Target Alias Description ECC score Gene Family Method Actions
Adi_g018223 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g024000 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g025859 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g12768 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g08351 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g08051 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g00969 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g09068 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.01G051600.1 Ceric.01G051600 not classified & original description: pacid=50592490... 0.03 OrthoFinder output from all 47 species
Ceric.25G014900.1 Ceric.25G014900 not classified & original description: pacid=50594354... 0.01 OrthoFinder output from all 47 species
Ceric.25G071400.1 Ceric.25G071400 not classified & original description: pacid=50593370... 0.03 OrthoFinder output from all 47 species
Ceric.27G020300.1 Ceric.27G020300 not classified & original description: pacid=50605628... 0.04 OrthoFinder output from all 47 species
Ceric.31G061400.1 Ceric.31G061400 not classified & original description: pacid=50575101... 0.05 OrthoFinder output from all 47 species
Dde_g02841 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g10033 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g12342 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g11399 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18902 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g01272 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g05577 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g09237 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g16481 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g16482 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g09433 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Pnu_g13102 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g06999 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g27184 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g18082 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g48472 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g00806 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g01889 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e028338_P001 Zm00001e028338 Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0003909 DNA ligase activity IEP HCCA
MF GO:0003910 DNA ligase (ATP) activity IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006298 mismatch repair IEP HCCA
BP GO:0006310 DNA recombination IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0008483 transaminase activity IEP HCCA
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP HCCA
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0030983 mismatched DNA binding IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 100 166
IPR000504 RRM_dom 13 78
IPR000504 RRM_dom 288 346
No external refs found!