Ehy_g15141 (RH39)


Aliases : RH39

Description : 23S-rRNA maturation helicase *(RH39) & original description: none


Gene families : OG0007220 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007220_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ehy_g15141
Cluster HCCA: Cluster_3

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00078p00161460 RH39,... DEAD-box ATP-dependent RNA helicase 39 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
AT4G09730 RH39 RH39 0.04 OrthoFinder output from all 47 species
Adi_g006743 RH39 23S-rRNA maturation helicase *(RH39) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g08996 RH39 23S-rRNA maturation helicase *(RH39) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g04355 RH39 23S-rRNA maturation helicase *(RH39) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.10G018800.1 RH39, Ceric.10G018800 23S-rRNA maturation helicase *(RH39) & original... 0.03 OrthoFinder output from all 47 species
Dcu_g14154 RH39 23S-rRNA maturation helicase *(RH39) & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g26269 RH39 23S-rRNA maturation helicase *(RH39) & original description: none 0.02 OrthoFinder output from all 47 species
Len_g18944 RH39 23S-rRNA maturation helicase *(RH39) & original description: none 0.03 OrthoFinder output from all 47 species
MA_12327g0010 RH39 DEAD-box ATP-dependent RNA helicase 39 OS=Oryza sativa... 0.06 OrthoFinder output from all 47 species
Mp5g09580.1 RH39 DEAD-box ATP-dependent RNA helicase 39 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
Nbi_g37282 RH39 23S-rRNA maturation helicase *(RH39) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g04468 RH39 23S-rRNA maturation helicase *(RH39) & original description: none 0.02 OrthoFinder output from all 47 species
Smo86079 RH39 DEAD-box ATP-dependent RNA helicase 39 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Solyc12g056740.2.1 RH39, Solyc12g056740 DEAD-box ATP-dependent RNA helicase 39 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
Spa_g05661 RH39 23S-rRNA maturation helicase *(RH39) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g19260 RH39 23S-rRNA maturation helicase *(RH39) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e029916_P001 RH39, Zm00001e029916 DEAD-box ATP-dependent RNA helicase 39 OS=Oryza sativa... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003747 translation release factor activity IEP HCCA
MF GO:0003852 2-isopropylmalate synthase activity IEP HCCA
MF GO:0004345 glucose-6-phosphate dehydrogenase activity IEP HCCA
BP GO:0005996 monosaccharide metabolic process IEP HCCA
BP GO:0006006 glucose metabolic process IEP HCCA
BP GO:0006415 translational termination IEP HCCA
BP GO:0006551 leucine metabolic process IEP HCCA
MF GO:0008079 translation termination factor activity IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009081 branched-chain amino acid metabolic process IEP HCCA
BP GO:0009082 branched-chain amino acid biosynthetic process IEP HCCA
BP GO:0009098 leucine biosynthetic process IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
BP GO:0019318 hexose metabolic process IEP HCCA
BP GO:0022411 cellular component disassembly IEP HCCA
BP GO:0032984 protein-containing complex disassembly IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
MF GO:0046912 acyltransferase activity, acyl groups converted into alkyl on transfer IEP HCCA
MF GO:0050661 NADP binding IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001650 Helicase_C 360 471
IPR011545 DEAD/DEAH_box_helicase_dom 140 324
No external refs found!