Aliases : RH39
Description : 23S-rRNA maturation helicase *(RH39) & original description: none
Gene families : OG0007220 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007220_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Ehy_g15141 | |
Cluster | HCCA: Cluster_3 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00078p00161460 | RH39,... | DEAD-box ATP-dependent RNA helicase 39 OS=Oryza sativa... | 0.03 | OrthoFinder output from all 47 species | |
AT4G09730 | RH39 | RH39 | 0.04 | OrthoFinder output from all 47 species | |
Adi_g006743 | RH39 | 23S-rRNA maturation helicase *(RH39) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aob_g08996 | RH39 | 23S-rRNA maturation helicase *(RH39) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aop_g04355 | RH39 | 23S-rRNA maturation helicase *(RH39) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ceric.10G018800.1 | RH39, Ceric.10G018800 | 23S-rRNA maturation helicase *(RH39) & original... | 0.03 | OrthoFinder output from all 47 species | |
Dcu_g14154 | RH39 | 23S-rRNA maturation helicase *(RH39) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Dde_g26269 | RH39 | 23S-rRNA maturation helicase *(RH39) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Len_g18944 | RH39 | 23S-rRNA maturation helicase *(RH39) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
MA_12327g0010 | RH39 | DEAD-box ATP-dependent RNA helicase 39 OS=Oryza sativa... | 0.06 | OrthoFinder output from all 47 species | |
Mp5g09580.1 | RH39 | DEAD-box ATP-dependent RNA helicase 39 OS=Oryza sativa... | 0.02 | OrthoFinder output from all 47 species | |
Nbi_g37282 | RH39 | 23S-rRNA maturation helicase *(RH39) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ore_g04468 | RH39 | 23S-rRNA maturation helicase *(RH39) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Smo86079 | RH39 | DEAD-box ATP-dependent RNA helicase 39 OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
Solyc12g056740.2.1 | RH39, Solyc12g056740 | DEAD-box ATP-dependent RNA helicase 39 OS=Oryza sativa... | 0.02 | OrthoFinder output from all 47 species | |
Spa_g05661 | RH39 | 23S-rRNA maturation helicase *(RH39) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Tin_g19260 | RH39 | 23S-rRNA maturation helicase *(RH39) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e029916_P001 | RH39, Zm00001e029916 | DEAD-box ATP-dependent RNA helicase 39 OS=Oryza sativa... | 0.05 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEA | Interproscan |
MF | GO:0005524 | ATP binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003747 | translation release factor activity | IEP | HCCA |
MF | GO:0003852 | 2-isopropylmalate synthase activity | IEP | HCCA |
MF | GO:0004345 | glucose-6-phosphate dehydrogenase activity | IEP | HCCA |
BP | GO:0005996 | monosaccharide metabolic process | IEP | HCCA |
BP | GO:0006006 | glucose metabolic process | IEP | HCCA |
BP | GO:0006415 | translational termination | IEP | HCCA |
BP | GO:0006551 | leucine metabolic process | IEP | HCCA |
MF | GO:0008079 | translation termination factor activity | IEP | HCCA |
BP | GO:0008652 | amino acid biosynthetic process | IEP | HCCA |
BP | GO:0009081 | branched-chain amino acid metabolic process | IEP | HCCA |
BP | GO:0009082 | branched-chain amino acid biosynthetic process | IEP | HCCA |
BP | GO:0009098 | leucine biosynthetic process | IEP | HCCA |
MF | GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors | IEP | HCCA |
MF | GO:0016616 | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | IEP | HCCA |
BP | GO:0019318 | hexose metabolic process | IEP | HCCA |
BP | GO:0022411 | cellular component disassembly | IEP | HCCA |
BP | GO:0032984 | protein-containing complex disassembly | IEP | HCCA |
BP | GO:0044281 | small molecule metabolic process | IEP | HCCA |
MF | GO:0046912 | acyltransferase activity, acyl groups converted into alkyl on transfer | IEP | HCCA |
MF | GO:0050661 | NADP binding | IEP | HCCA |
BP | GO:1901605 | alpha-amino acid metabolic process | IEP | HCCA |
BP | GO:1901607 | alpha-amino acid biosynthetic process | IEP | HCCA |
No external refs found! |