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  5. Ehy_g15128

Ehy_g15128 (BUM1, SHL, STM, WAM, WAM1, BUM)


Aliases : BUM1, SHL, STM, WAM, WAM1, BUM

Description : KNOX-type transcription factor & original description: none


Gene families : OG0000252 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000252_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ehy_g15128

Target Alias Description ECC score Gene Family Method Actions
Adi_g017500 KNAT3 KNOX-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g085793 BUM1, SHL, STM,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g08926 BUM1, SHL, STM,... KNOX-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021179.70 KNAT3 RNA biosynthesis.transcriptional activation.HB... 0.02 OrthoFinder output from all 47 species
GSVIVT01030488001 BUM1, SHL, STM,... RNA biosynthesis.transcriptional activation.HB... 0.03 OrthoFinder output from all 47 species
MA_3582g0010 KNAT3 transcription factor (KNOX) 0.03 OrthoFinder output from all 47 species
Msp_g01587 KNAT3 KNOX-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g07188 KNAT3 KNOX-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0003.g001775 BUM1, SHL, STM,... KNOX-type transcription factor & original description: CDS=1-1104 0.03 OrthoFinder output from all 47 species
Zm00001e011538_P001 BP, BP1, KNAT1,... transcription factor (KNOX) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
CC GO:0005634 nucleus IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0043015 gamma-tubulin binding IEP HCCA
InterPro domains Description Start Stop
IPR008422 Homeobox_KN_domain 335 374
IPR005541 KNOX2 205 249
IPR005539 ELK_dom 296 316
IPR005540 KNOX1 151 191
No external refs found!