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  5. Ehy_g14554

Ehy_g14554 (ATSS4, SS4, SSIV)


Aliases : ATSS4, SS4, SSIV

Description : starch synthase *(SS5) & original description: none


Gene families : OG0000693 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000693_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ehy_g14554

Target Alias Description ECC score Gene Family Method Actions
Aob_g02168 ATSS4, SS4, SSIV not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0011.g012741 ATSS4, SS4, SSIV starch synthase *(SS5) & original description: CDS=57-2150 0.02 OrthoFinder output from all 47 species
Cba_g33306 ATSS4, SS4, SSIV starch synthase *(SS4) & original description: none 0.02 OrthoFinder output from all 47 species
Gb_37508 ATSS4, SS4, SSIV Probable starch synthase 4, chloroplastic/amyloplastic... 0.03 OrthoFinder output from all 47 species
Ppi_g43473 ATSS3, SS3 starch synthase *(SS3) & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0004.g002377 No alias not classified & original description: CDS=88-582 0.03 OrthoFinder output from all 47 species
Sam_g29362 No alias starch synthase *(SS4) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g26044 ATSS4, SS4, SSIV starch synthase *(SS4) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e023644_P003 Zm00001e023644 Probable starch synthase 4, chloroplastic/amyloplastic... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000387 spliceosomal snRNP assembly IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0022618 ribonucleoprotein complex assembly IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0071826 ribonucleoprotein complex subunit organization IEP HCCA
InterPro domains Description Start Stop
IPR013534 Starch_synth_cat_dom 225 464
No external refs found!