GSVIVT01000015001


Description : 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING Encodes a putative RING-H2 zinc finger protein ATL6 (ATL6). ATL6


Gene families : OG_01_0000002 (Gene family) Phylogenetic Tree(s): OG0000002_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): GSVIVT01000015001
Cluster HCCA cluster: Cluster_213

Target Alias Description ECC score Gene Family Method Actions
AT1G35330 No alias RING/U-box superfamily protein 0.02 Gene family
AT1G49230 No alias RING/U-box superfamily protein 0.02 Gene family
AT2G35000 No alias RING/U-box superfamily protein 0.03 Gene family
AT2G44578 No alias RING/U-box superfamily protein 0.04 Gene family
AT3G05200 ATL6 RING/U-box superfamily protein 0.07 Gene family
AT3G16720 ATL2, TL2 TOXICOS EN LEVADURA 2 0.03 Gene family
AT4G35480 RHA3B RING-H2 finger A3B 0.04 Gene family
AT5G66070 No alias RING/U-box superfamily protein 0.04 Gene family
GSVIVT01032684001 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
LOC_Os02g36330 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.04 Gene family
LOC_Os02g46600 Os02g0692000 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
LOC_Os02g52210 Os02g0759400 No description available 0.05 Gene family
LOC_Os03g44636 Os03g0648600 No description available 0.02 Gene family
LOC_Os03g44642 No alias No description available 0.03 Gene family
LOC_Os04g37740 Os04g0450400 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
LOC_Os04g49700 Os04g0586700 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
LOC_Os06g09310 Os06g0192800 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
LOC_Os06g11450 Os06g0218300 No description available 0.03 Gene family
LOC_Os06g34880 Os06g0540200 No description available 0.02 Gene family
LOC_Os08g43670 Os08g0550400 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
LOC_Os10g41660 Os10g0566400 No description available 0.03 Gene family
LOC_Os12g24490 Os12g0432600 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING E3... 0.03 Gene family
MA_10432668g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
MA_10436208g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.05 Gene family
MA_12363g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.04 Gene family
MA_129306g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
MA_152783g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
MA_26001g0020 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
MA_465316g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.04 Gene family
MA_786911g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
MA_80729g0030 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
Smo121181 PACid_15415477 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
Smo59303 PACid_15409233 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
Smo96681 PACid_15409405 No description available 0.03 Gene family
Solyc01g066430.3.1 Solyc01g066430.3 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.05 Gene family
Solyc02g082420.3.1 Solyc02g082420.3 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING ATL8 0.02 Gene family
Solyc03g112340.1.1 Solyc03g112340.1 No description available 0.03 Gene family
Solyc03g123680.1.1 Solyc03g123680.1 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
Solyc05g055390.3.1 Solyc05g055390.3 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.05 Gene family
Solyc07g006400.2.1 Solyc07g006400.2 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
Solyc09g075320.1.1 Solyc09g075320.1 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
Solyc10g008080.2.1 Solyc10g008080.2 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
Solyc10g081780.2.1 Solyc10g081780.2 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
Solyc11g066510.2.1 Solyc11g066510.2 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
Solyc12g055710.1.1 Solyc12g055710.1 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.04 Gene family
Zm00001d002491 GRMZM2G090279 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
Zm00001d002535 GRMZM2G146847 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
Zm00001d003497 GRMZM2G171277 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
Zm00001d005936 GRMZM2G015753 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.07 Gene family
Zm00001d008914 GRMZM2G014571 No description available 0.03 Gene family
Zm00001d009106 GRMZM2G004519 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
Zm00001d016840 GRMZM2G460958 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
Zm00001d020789 GRMZM2G082653 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
Zm00001d021316 GRMZM2G449875 No description available 0.03 Gene family
Zm00001d022154 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.05 Gene family
Zm00001d029806 GRMZM2G052344 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
Zm00001d031880 No alias No description available 0.03 Gene family
Zm00001d037023 GRMZM2G447566 No description available 0.05 Gene family
Zm00001d037095 GRMZM2G416750 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.05 Gene family
Zm00001d038420 GRMZM2G075782 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.04 Gene family
Zm00001d045051 GRMZM2G478553 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.05 Gene family
Zm00001d046151 GRMZM2G121143 No description available 0.02 Gene family
Zm00001d050514 GRMZM2G068239 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
Zm00001d050798 GRMZM2G044773 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.05 Gene family
Zm00001d050840 GRMZM2G041344 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
Zm00001d051833 GRMZM5G885045 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
Zm00001d051894 GRMZM2G146228 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
Zm00001d052342 GRMZM2G033086 No description available 0.02 Gene family

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001841 Znf_RING 170 213
No external refs found!