Solyc12g100353.1.1 (Solyc12g100353.1)

Aliases : Solyc12g100353.1

Description : 29.5.3 protein.degradation.cysteine protease Similar to maize DEK1, a gene encoding a membrane protein of the calpain gene superfamily required for aleurone cell development in the endosperm of maize grains. A key component of the embryonic L1 cell-layer specification pathway. DEFECTIVE KERNEL 1 (DEK1)

Gene families : OG_01_0002169 (Gene family) Phylogenetic Tree(s): OG0002169_tree

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR network (cutoff 100): Solyc12g100353.1.1
Cluster	HCCA cluster: Cluster_37

Target	Alias	Description	ECC score	Gene Family Method
AT1G55350	EMB80, EMB1275,...	calpain-type cysteine protease family	0.17	Gene family
GSVIVT01025470001	No alias	29.5.3 protein.degradation.cysteine protease Similar to...	0.15	Gene family
LOC_Os02g47970	Os02g0709400	29.5.3 protein.degradation.cysteine protease Similar to...	0.09	Gene family
MA_129368g0010	No alias	29.5.3 protein.degradation.cysteine protease Similar to...	0.12	Gene family
MA_8967622g0010	No alias	29.5.3 protein.degradation.cysteine protease Similar to...	0.02	Gene family
Smo235391	PACid_15405421	29.5.3 protein.degradation.cysteine protease Similar to...	0.07	Gene family
Smo236021	PACid_15405894	29.5.3 protein.degradation.cysteine protease Similar to...	0.07	Gene family
Zm00001d028818	GRMZM2G321753	29.5.3 protein.degradation.cysteine protease Similar to...	0.16	Gene family

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004175	endopeptidase activity	None	Extended
MF	GO:0004197	cysteine-type endopeptidase activity	None	Extended
MF	GO:0004198	calcium-dependent cysteine-type endopeptidase activity	IEA	InterProScan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005622	intracellular	IEA	InterProScan
BP	GO:0006508	proteolysis	IEA	InterProScan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008233	peptidase activity	None	Extended
MF	GO:0008234	cysteine-type peptidase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
CC	GO:0044464	cell part	None	Extended
MF	GO:0070011	peptidase activity, acting on L-amino acid peptides	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001300	Peptidase_C2_calpain_cat	1647	1946
IPR022682	Calpain_domain_III	1958	2095

External Links

No external refs found!

Solyc12g100353.1.1 (Solyc12g100353.1)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation