Solyc12g100353.1.1 (Solyc12g100353.1)


Aliases : Solyc12g100353.1

Description : 29.5.3 protein.degradation.cysteine protease Similar to maize DEK1, a gene encoding a membrane protein of the calpain gene superfamily required for aleurone cell development in the endosperm of maize grains. A key component of the embryonic L1 cell-layer specification pathway. DEFECTIVE KERNEL 1 (DEK1)


Gene families : OG_01_0002169 (Gene family) Phylogenetic Tree(s): OG0002169_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc12g100353.1.1
Cluster HCCA cluster: Cluster_37

Target Alias Description ECC score Gene Family Method Actions
AT1G55350 EMB80, EMB1275,... calpain-type cysteine protease family 0.17 Gene family
GSVIVT01025470001 No alias 29.5.3 protein.degradation.cysteine protease Similar to... 0.15 Gene family
LOC_Os02g47970 Os02g0709400 29.5.3 protein.degradation.cysteine protease Similar to... 0.09 Gene family
MA_129368g0010 No alias 29.5.3 protein.degradation.cysteine protease Similar to... 0.12 Gene family
MA_8967622g0010 No alias 29.5.3 protein.degradation.cysteine protease Similar to... 0.02 Gene family
Smo235391 PACid_15405421 29.5.3 protein.degradation.cysteine protease Similar to... 0.07 Gene family
Smo236021 PACid_15405894 29.5.3 protein.degradation.cysteine protease Similar to... 0.07 Gene family
Zm00001d028818 GRMZM2G321753 29.5.3 protein.degradation.cysteine protease Similar to... 0.16 Gene family

Type GO Term Name Evidence Source
MF GO:0004198 calcium-dependent cysteine-type endopeptidase activity IEA InterProScan
CC GO:0005622 intracellular IEA InterProScan
BP GO:0006508 proteolysis IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001300 Peptidase_C2_calpain_cat 1647 1946
IPR022682 Calpain_domain_III 1958 2095
No external refs found!