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Aliases : CRR22
Description : not classified & original description: none
Gene families : OG0000043 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Adi_g002453 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g007230 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g010386 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g012573 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g021084 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g023513 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g055309 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g056275 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Adi_g058542 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g059087 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g059695 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g077328 | EMB2758 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Adi_g085247 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g02274 | CRR22 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g02562 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g07789 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g11380 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g19837 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g30236 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g38619 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g04749 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g04974 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g05733 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g06417 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g06418 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g07076 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g07408 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g17868 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g18219 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g18793 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g19167 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Als_g26697 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g54929 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g55254 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g55301 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g55307 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g55312 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g55324 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g06180 | CRR22 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g21145 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g23955 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g31319 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g31791 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g70111 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Azfi_s0131.g049164 | No alias | not classified & original description: CDS=1-2763 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0250.g060258 | No alias | not classified & original description: CDS=1-1893 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0254.g060453 | No alias | not classified & original description: CDS=1-2166 | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0345.g065805 | No alias | not classified & original description: CDS=1-2679 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0469.g072874 | CRR22 | not classified & original description: CDS=1-1206 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s1399.g102577 | No alias | not classified & original description: CDS=1-951 | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g05328 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g07618 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g23174 | CRR22 | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g30014 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g67241 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g67244 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g67893 | CRR22 | ssDNA-binding protein *(OSB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.11G019200.1 | Ceric.11G019200 | not classified & original description: pacid=50596467... | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.11G090500.1 | Ceric.11G090500 | not classified & original description: pacid=50596019... | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.11G091700.1 | Ceric.11G091700 | ssDNA-binding protein *(OSB) & original description:... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.13G012100.1 | VAC1, ECB2,... | not classified & original description: pacid=50635600... | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.14G076500.1 | Ceric.14G076500 | not classified & original description: pacid=50633826... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.18G062200.1 | Ceric.18G062200 | not classified & original description: pacid=50622099... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.21G027500.1 | Ceric.21G027500 | not classified & original description: pacid=50603039... | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.21G077300.1 | Ceric.21G077300 | not classified & original description: pacid=50604263... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.21G089400.1 | Ceric.21G089400 | not classified & original description: pacid=50603367... | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.23G026100.1 | Ceric.23G026100 | not classified & original description: pacid=50611257... | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.29G083700.1 | Ceric.29G083700 | not classified & original description: pacid=50625623... | 0.06 | OrthoFinder output from all 47 species | |
| Ceric.37G017500.1 | VAC1, ECB2,... | ssDNA-binding protein *(OSB) & original description:... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.37G043200.1 | Ceric.37G043200 | not classified & original description: pacid=50616612... | 0.06 | OrthoFinder output from all 47 species | |
| Dac_g09663 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g10603 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Dac_g14985 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g21332 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Dac_g28876 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g29239 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g30497 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g31479 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g33753 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g36893 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g46306 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g05383 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g06991 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g18161 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g19719 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g23952 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g23967 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g24767 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g24777 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g26328 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g47763 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g48080 | OTP86 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g51784 | OTP86 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Len_g14345 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Len_g19433 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g22449 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g23238 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Len_g24004 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g30749 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Len_g59872 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g04235 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g05010 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g05014 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g06175 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g06274 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g06759 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g07352 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g07845 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g10192 | VAC1, ECB2, ATECB2 | ssDNA-binding protein *(OSB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g11913 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g11914 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g12593 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g07395 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g17300 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g20777 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g35706 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g45899 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g04423 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g09624 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g17001 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g18405 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Nbi_g25433 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g06842 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g07232 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g16220 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g18166 | DOT4 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g18859 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g19560 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g29461 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g57073 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g60441 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g02334 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g03867 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g06936 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g10237 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g18939 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g32017 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g55632 | No alias | cofactor of plastid-encoded RNA polymerase *(TAC9) &... | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0238.g026585 | VAC1, ECB2, ATECB2 | not classified & original description: CDS=1-2277 | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g07064 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g09276 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g12591 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g18164 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g18632 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g24544 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g25360 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g25904 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g27503 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g04234 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g05090 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g06220 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g14175 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g17847 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g17848 | OTP86 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g21310 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g22163 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g23501 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g26365 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g26847 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g49341 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g54985 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g56054 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g57330 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g06681 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g08795 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g09995 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g10096 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g12894 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g21953 | No alias | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Tin_g29152 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g29783 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g34089 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g40520 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000154 | rRNA modification | IEP | HCCA |
| BP | GO:0001510 | RNA methylation | IEP | HCCA |
| BP | GO:0006364 | rRNA processing | IEP | HCCA |
| BP | GO:0006396 | RNA processing | IEP | HCCA |
| MF | GO:0008168 | methyltransferase activity | IEP | HCCA |
| MF | GO:0008170 | N-methyltransferase activity | IEP | HCCA |
| MF | GO:0008173 | RNA methyltransferase activity | IEP | HCCA |
| MF | GO:0008649 | rRNA methyltransferase activity | IEP | HCCA |
| MF | GO:0008757 | S-adenosylmethionine-dependent methyltransferase activity | IEP | HCCA |
| BP | GO:0009451 | RNA modification | IEP | HCCA |
| BP | GO:0016072 | rRNA metabolic process | IEP | HCCA |
| MF | GO:0016436 | rRNA (uridine) methyltransferase activity | IEP | HCCA |
| MF | GO:0016741 | transferase activity, transferring one-carbon groups | IEP | HCCA |
| BP | GO:0031167 | rRNA methylation | IEP | HCCA |
| BP | GO:0032259 | methylation | IEP | HCCA |
| BP | GO:0034470 | ncRNA processing | IEP | HCCA |
| BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
| BP | GO:0043414 | macromolecule methylation | IEP | HCCA |
| MF | GO:0070042 | rRNA (uridine-N3-)-methyltransferase activity | IEP | HCCA |
| BP | GO:0070475 | rRNA base methylation | IEP | HCCA |
| MF | GO:0140098 | catalytic activity, acting on RNA | IEP | HCCA |
| MF | GO:0140102 | catalytic activity, acting on a rRNA | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 267 | 314 |
| IPR002885 | Pentatricopeptide_repeat | 168 | 213 |
| IPR002885 | Pentatricopeptide_repeat | 494 | 540 |
| IPR002885 | Pentatricopeptide_repeat | 466 | 493 |
| IPR002885 | Pentatricopeptide_repeat | 242 | 262 |
| IPR002885 | Pentatricopeptide_repeat | 381 | 411 |
| IPR002885 | Pentatricopeptide_repeat | 353 | 375 |
| No external refs found! |