Solyc12g100180.2.1 (Solyc12g100180.2)


Aliases : Solyc12g100180.2

Description : 34.16 transport.ABC transporters and multidrug resistance systems ABC transporter family involved in ABA transport and resistance to lead. Localizes to plasma membrane. Upregulated by lead. Expressed in leaves, flowers, stomata and roots. pleiotropic drug resistance 12 (PDR12)


Gene families : OG_01_0000021 (Gene family) Phylogenetic Tree(s): OG0000021_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc12g100180.2.1
Cluster HCCA cluster: Cluster_36

Target Alias Description ECC score Gene Family Method Actions
AT1G15520 ABCG40, PDR12,... pleiotropic drug resistance 12 0.02 Gene family
AT3G53480 PIS1, ABCG37,... pleiotropic drug resistance 9 0.02 Gene family
AT4G15236 No alias ABC-2 and Plant PDR ABC-type transporter family protein 0.02 Gene family
GSVIVT01016993001 No alias 34.16 transport.ABC transporters and multidrug... 0.03 Gene family
GSVIVT01016998001 No alias 34.16 transport.ABC transporters and multidrug... 0.03 Gene family
GSVIVT01017198001 No alias 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
GSVIVT01017202001 No alias 34.16 transport.ABC transporters and multidrug... 0.03 Gene family
GSVIVT01017337001 No alias 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
GSVIVT01035715001 No alias 34.16 transport.ABC transporters and multidrug... 0.03 Gene family
GSVIVT01035785001 No alias 34.16 transport.ABC transporters and multidrug... 0.03 Gene family
GSVIVT01035786001 No alias 34.16 transport.ABC transporters and multidrug... 0.03 Gene family
LOC_Os02g21340 Os02g0318450,... 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
LOC_Os09g16330 Os09g0332700 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
LOC_Os11g37700 Os11g0587600 34.16 transport.ABC transporters and multidrug... 0.04 Gene family
MA_10426781g0010 No alias 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
MA_18770g0010 No alias 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
Smo101338 PACid_15402365 No description available 0.02 Gene family
Smo115821 PACid_15402703 No description available 0.02 Gene family
Smo424639 PACid_15403687 No description available 0.02 Gene family
Solyc05g018510.3.1 Solyc05g018510.3 34.16 transport.ABC transporters and multidrug... 0.06 Gene family
Solyc06g065655.1.1 Solyc06g065655.1 34.16 transport.ABC transporters and multidrug... 0.07 Gene family
Solyc06g065670.3.1 Solyc06g065670.3 34.16 transport.ABC transporters and multidrug... 0.03 Gene family
Zm00001d009037 No alias 34.16 transport.ABC transporters and multidrug... 0.03 Gene family
Zm00001d034940 GRMZM2G391815 34.16 transport.ABC transporters and multidrug... 0.04 Gene family
Zm00001d036986 GRMZM2G029506 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
Zm00001d039631 GRMZM2G118243 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
Zm00001d044442 GRMZM5G874955 34.16 transport.ABC transporters and multidrug... 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan
MF GO:0016887 ATPase activity IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003439 ABC_transporter-like 184 366
IPR003439 ABC_transporter-like 2271 2421
IPR003439 ABC_transporter-like 1589 1771
IPR029481 ABC_trans_N 1513 1564
IPR029481 ABC_trans_N 89 159
IPR013525 ABC_2_trans 1162 1376
IPR013525 ABC_2_trans 1924 2136
IPR013525 ABC_2_trans 2567 2780
IPR013525 ABC_2_trans 520 732
IPR003439 ABC_transporter-like 865 1017
IPR013581 PDR_assoc 2141 2204
IPR013581 PDR_assoc 737 800
No external refs found!