Adi_g065042


Description : RNA editing factor *(OZ) & original description: none


Gene families : OG0001673 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001673_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g065042

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00060p00085440 evm_27.TU.AmTr_v1... Zinc finger protein VAR3, chloroplastic OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00170p00058310 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
Ala_g11397 No alias RNA editing factor *(OZ) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g19541 No alias RNA editing factor *(OZ) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19944 No alias RNA editing factor *(OZ) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.03G001300.1 Ceric.03G001300 RNA editing factor *(OZ) & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.26G046600.1 Ceric.26G046600 RNA editing factor *(OZ) & original description:... 0.03 OrthoFinder output from all 47 species
Dcu_g16799 No alias RNA editing factor *(OZ) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g31737 No alias RNA editing factor *(OZ) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g04668 No alias RNA editing factor *(OZ) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01008444001 No alias Zinc finger protein VAR3, chloroplastic OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01011669001 No alias Zinc finger protein VAR3, chloroplastic OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01014166001 No alias No description available 0.02 OrthoFinder output from all 47 species
Gb_38905 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os01g10630.1 LOC_Os01g10630 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_10436123g0010 No alias RNA editing factor (OZ-type) 0.02 OrthoFinder output from all 47 species
MA_854125g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp5g05510.1 No alias RNA editing factor (OZ-type) 0.02 OrthoFinder output from all 47 species
Sam_g06378 No alias RNA editing factor *(OZ) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g07101 No alias RNA editing factor *(OZ) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
InterPro domains Description Start Stop
IPR001876 Znf_RanBP2 286 312
IPR001876 Znf_RanBP2 252 273
No external refs found!