Solyc12g096910.1.1 (Solyc12g096910.1)


Aliases : Solyc12g096910.1

Description : 27.2 RNA.transcription RNA polymerase beta' subunit-2 RPOC2


Gene families : OG_01_0001467 (Gene family) Phylogenetic Tree(s): OG0001467_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc12g096910.1.1
Cluster HCCA cluster: Cluster_110

Target Alias Description ECC score Gene Family Method Actions
ATCG00170 RPOC2 DNA-directed RNA polymerase family protein 0.05 Gene family
GSVIVT01019173001 No alias 27.2 RNA.transcription RNA polymerase beta' subunit-2 RPOC2 0.05 Gene family
GSVIVT01021669001 No alias No description available 0.03 Gene family
GSVIVT01030958001 No alias 27.2 RNA.transcription RNA polymerase beta' subunit-2 RPOC2 0.03 Gene family
LOC_Os04g16830 No alias 27.2 RNA.transcription RNA polymerase beta' subunit-2 RPOC2 0.03 Gene family
Solyc01g017510.1.1 Solyc01g017510.1 27.2 RNA.transcription RNA polymerase beta' subunit-2 RPOC2 0.09 Gene family
Solyc08g028920.2.1 Solyc08g028920.2 27.2 RNA.transcription RNA polymerase beta' subunit-2 RPOC2 0.06 Gene family

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEA InterProScan
BP GO:0006351 transcription, DNA-templated IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR007081 RNA_pol_Rpb1_5 6 58
No external refs found!