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  5. Ehy_g13934

Ehy_g13934


Description : protein involved in PS-I assembly *(PYG7) & original description: none


Gene families : OG0005614 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005614_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ehy_g13934

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00077p00138060 evm_27.TU.AmTr_v1... Photosynthesis.photophosphorylation.photosystem... 0.02 OrthoFinder output from all 47 species
AT1G22700 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.05 OrthoFinder output from all 47 species
Aob_g01175 No alias protein involved in PS-I assembly *(PYG7) & original... 0.06 OrthoFinder output from all 47 species
Aop_g07913 No alias protein involved in PS-I assembly *(PYG7) & original... 0.02 OrthoFinder output from all 47 species
Cre12.g524300 No alias Photosynthesis.photophosphorylation.photosystem... 0.01 OrthoFinder output from all 47 species
GSVIVT01034503001 No alias Photosynthesis.photophosphorylation.photosystem... 0.05 OrthoFinder output from all 47 species
Gb_28677 No alias PYG7 protein involved in PS-I assembly 0.05 OrthoFinder output from all 47 species
MA_133089g0010 No alias PYG7 protein involved in PS-I assembly 0.04 OrthoFinder output from all 47 species
Ppi_g15480 No alias protein involved in PS-I assembly *(PYG7) & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0068.g016391 No alias protein involved in PS-I assembly *(PYG7) & original... 0.03 OrthoFinder output from all 47 species
Smo90520 No alias Photosynthesis.photophosphorylation.photosystem... 0.02 OrthoFinder output from all 47 species
Solyc11g017200.2.1 Solyc11g017200 PYG7 protein involved in PS-I assembly 0.05 OrthoFinder output from all 47 species
Zm00001e034869_P002 Zm00001e034869 PYG7 protein involved in PS-I assembly 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001440 TPR_1 321 353
IPR019734 TPR_repeat 286 317
No external refs found!