Solyc12g089380.2.1 (Solyc12g089380.2)


Aliases : Solyc12g089380.2

Description : 10.7 cell wall.modification member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio) expansin 11 (EXPA11)


Gene families : OG_01_0000017 (Gene family) Phylogenetic Tree(s): OG0000017_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc12g089380.2.1
Cluster HCCA cluster: Cluster_66

Target Alias Description ECC score Gene Family Method Actions
AT1G12560 ATEXP7, EXPA7,... expansin A7 0.04 Gene family
AT1G20190 ATEXPA11, ATHEXP... expansin 11 0.05 Gene family
AT1G62980 EXPA18, EXP18,... expansin A18 0.04 Gene family
AT1G69530 ATEXPA1, EXP1,... expansin A1 0.05 Gene family
AT2G37640 ATEXPA3, EXP3,... Barwin-like endoglucanases superfamily protein 0.07 Gene family
AT2G40610 EXPA8, ATHEXP... expansin A8 0.06 Gene family
AT3G15370 ATHEXP ALPHA... expansin 12 0.03 Gene family
AT3G29030 EXP5, ATHEXP... expansin A5 0.05 Gene family
AT4G01630 ATHEXP ALPHA... expansin A17 0.06 Gene family
AT5G02260 EXP9, EXPA9,... expansin A9 0.03 Gene family
AT5G05290 EXPA2, ATHEXP... expansin A2 0.03 Gene family
AT5G39260 EXPA21, EXP21,... expansin A21 0.03 Gene family
AT5G56320 ATEXP14, EXPA14,... expansin A14 0.03 Gene family
GSVIVT01007987001 No alias 10.7 cell wall.modification Member of Alpha-Expansin... 0.02 Gene family
GSVIVT01008762001 No alias 10.7 cell wall.modification member of Alpha-Expansin... 0.03 Gene family
GSVIVT01011437001 No alias 10.7 cell wall.modification Encodes an expansin. Naming... 0.03 Gene family
GSVIVT01024572001 No alias 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family
GSVIVT01028474001 No alias 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family
GSVIVT01029411001 No alias 10.7 cell wall.modification Encodes an expansin. Naming... 0.04 Gene family
GSVIVT01032681001 No alias 10.7 cell wall.modification member of Alpha-Expansin... 0.03 Gene family
GSVIVT01033691001 No alias 10.7 cell wall.modification putative expansin. Naming... 0.02 Gene family
LOC_Os01g14660 Os01g0249100 10.7 cell wall.modification member of Alpha-Expansin... 0.05 Gene family
LOC_Os01g16770 Os01g0274500 10.7 cell wall.modification Encodes an expansin. Naming... 0.02 Gene family
LOC_Os01g60770 Os01g0823100 10.7 cell wall.modification Member of Alpha-Expansin... 0.01 Gene family
LOC_Os02g16780 Os02g0267700 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family
LOC_Os02g16850 Os02g0268600 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family
LOC_Os03g06000 Os03g0155300 10.7 cell wall.modification member of Alpha-Expansin... 0.03 Gene family
LOC_Os03g06010 Os03g0155500 10.7 cell wall.modification member of Alpha-Expansin... 0.05 Gene family
LOC_Os03g06020 Os03g0155700 10.7 cell wall.modification member of Alpha-Expansin... 0.08 Gene family
LOC_Os03g06050 Os03g0156000 10.7 cell wall.modification member of Alpha-Expansin... 0.04 Gene family
LOC_Os03g06060 Os03g0156300 10.7 cell wall.modification member of Alpha-Expansin... 0.03 Gene family
LOC_Os03g21820 Os03g0336400 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family
LOC_Os03g31480 Os03g0428700 10.7 cell wall.modification member of Alpha-Expansin... 0.04 Gene family
LOC_Os04g15840 Os04g0228400 10.7 cell wall.modification member of Alpha-Expansin... 0.09 Gene family
LOC_Os05g19570 Os05g0276500 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family
LOC_Os05g19600 Os05g0277000 10.7 cell wall.modification member of Alpha-Expansin... 0.08 Gene family
LOC_Os05g39990 Os05g0477600 10.7 cell wall.modification Member of Alpha-Expansin... 0.03 Gene family
LOC_Os06g41700 Os06g0621900 10.7 cell wall.modification expansin -like protein.... 0.02 Gene family
LOC_Os10g30330 Os10g0439100 10.7 cell wall.modification member of Alpha-Expansin... 0.03 Gene family
LOC_Os10g30340 Os10g0439200 10.7 cell wall.modification member of Alpha-Expansin... 0.05 Gene family
LOC_Os10g39110 Os10g0535900 10.7 cell wall.modification Member of Alpha-Expansin... 0.04 Gene family
MA_130258g0010 No alias 10.7 cell wall.modification Member of Alpha-Expansin... 0.03 Gene family
MA_134413g0010 No alias 10.7 cell wall.modification member of Alpha-Expansin... 0.01 Gene family
MA_184474g0010 No alias 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family
MA_30127g0010 No alias 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family
MA_36587g0010 No alias 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family
MA_40314g0010 No alias 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family
MA_40671g0010 No alias 10.7 cell wall.modification member of Alpha-Expansin... 0.03 Gene family
MA_45587g0020 No alias 10.7 cell wall.modification Member of Alpha-Expansin... 0.03 Gene family
MA_61945g0010 No alias 10.7 cell wall.modification member of Alpha-Expansin... 0.01 Gene family
MA_792493g0010 No alias 10.7 cell wall.modification Member of Alpha-Expansin... 0.02 Gene family
MA_915221g0010 No alias 10.7 cell wall.modification Member of Alpha-Expansin... 0.03 Gene family
Smo102623 PACid_15407497 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family
Smo143857 PACid_15418621 10.7 cell wall.modification member of Alpha-Expansin... 0.04 Gene family
Smo236978 PACid_15412986 10.7 cell wall.modification expansin-like protein.... 0.01 Gene family
Smo75237 PACid_15411282 10.7 cell wall.modification Member of Alpha-Expansin... 0.03 Gene family
Smo90935 PACid_15416360 10.7 cell wall.modification Encodes an expansin. Naming... 0.04 Gene family
Solyc03g115270.2.1 Solyc03g115270.2 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family
Solyc04g081870.3.1 Solyc04g081870.3 10.7 cell wall.modification member of Alpha-Expansin... 0.03 Gene family
Solyc09g010860.3.1 Solyc09g010860.3 10.7 cell wall.modification member of Alpha-Expansin... 0.03 Gene family
Solyc09g018020.3.1 Solyc09g018020.3 10.7 cell wall.modification Encodes an expansin. Naming... 0.02 Gene family
Zm00001d016022 GRMZM2G146540 10.7 cell wall.modification member of Alpha-Expansin... 0.03 Gene family
Zm00001d025018 GRMZM2G074585 10.7 cell wall.modification member of Alpha-Expansin... 0.05 Gene family
Zm00001d026014 GRMZM2G072121 10.7 cell wall.modification member of Alpha-Expansin... 0.04 Gene family
Zm00001d027717 GRMZM2G173826 10.7 cell wall.modification member of Alpha-Expansin... 0.03 Gene family
Zm00001d027718 GRMZM2G073373 10.7 cell wall.modification member of Alpha-Expansin... 0.01 Gene family
Zm00001d032876 No alias 10.7 cell wall.modification member of Alpha-Expansin... 0.07 Gene family
Zm00001d032881 No alias 10.7 cell wall.modification member of Alpha-Expansin... 0.07 Gene family
Zm00001d032882 No alias 10.7 cell wall.modification member of Alpha-Expansin... 0.07 Gene family
Zm00001d032883 GRMZM2G332412 10.7 cell wall.modification member of Alpha-Expansin... 0.03 Gene family
Zm00001d032884 GRMZM2G035189 10.7 cell wall.modification member of Alpha-Expansin... 0.04 Gene family
Zm00001d032886 GRMZM2G414779 10.7 cell wall.modification member of Alpha-Expansin... 0.07 Gene family
Zm00001d034663 GRMZM2G368886 10.7 cell wall.modification member of Alpha-Expansin... 0.05 Gene family
Zm00001d035101 GRMZM2G374248 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family
Zm00001d035102 No alias 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family
Zm00001d035104 No alias 10.7 cell wall.modification member of Alpha-Expansin... 0.03 Gene family
Zm00001d035111 GRMZM2G064174 10.7 cell wall.modification member of Alpha-Expansin... 0.03 Gene family
Zm00001d035112 GRMZM2G019398 10.7 cell wall.modification member of Alpha-Expansin... 0.03 Gene family
Zm00001d040247 GRMZM2G094523 10.7 cell wall.modification Member of Alpha-Expansin... 0.03 Gene family
Zm00001d040249 No alias 10.7 cell wall.modification member of Alpha-Expansin... 0.03 Gene family
Zm00001d040379 GRMZM2G149605 10.7 cell wall.modification member of Alpha-Expansin... 0.03 Gene family
Zm00001d047353 GRMZM2G127029 10.7 cell wall.modification Member of Alpha-Expansin... 0.03 Gene family
Zm00001d048418 No alias 10.7 cell wall.modification member of Alpha-Expansin... 0.09 Gene family

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR007117 Expansin_CBD 165 242
IPR009009 RlpA-like_DPBB 66 154
No external refs found!