Solyc12g088980.2.1 (Solyc12g088980.2)


Aliases : Solyc12g088980.2

Description : 35.1 not assigned.no ontology Transducin/WD40 repeat-like superfamily protein


Gene families : OG_01_0000208 (Gene family) Phylogenetic Tree(s): OG0000208_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc12g088980.2.1
Cluster HCCA cluster: Cluster_111

Target Alias Description ECC score Gene Family Method Actions
AT2G26490 No alias Transducin/WD40 repeat-like superfamily protein 0.05 Gene family
AT3G50390 No alias Transducin/WD40 repeat-like superfamily protein 0.1 Gene family
LOC_Os03g52870 Os03g0738700 35.1 not assigned.no ontology Transducin/WD40... 0.03 Gene family
Solyc02g090150.1.1 Solyc02g090150.1 31.1 cell.organisation Transducin/WD40 repeat-like... 0.02 Gene family
Solyc07g025140.3.1 Solyc07g025140.3 35.1 not assigned.no ontology Transducin/WD40... 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001680 WD40_repeat 179 208
IPR001680 WD40_repeat 70 96
IPR001680 WD40_repeat 214 249
IPR001680 WD40_repeat 347 392
IPR001680 WD40_repeat 111 134
IPR001680 WD40_repeat 307 339
IPR001680 WD40_repeat 263 297
No external refs found!